Toggle navigation
Home
About
Project overview
Policies
News
Contact
Data
Experiments
Annotations
Single Cell Embeddings
Statistical Models
Gene Perturbations
Data Standards & QC
Pipelines
Consortia
Publications
Tools
Single Cell Browser
Help
Getting started
Schema
Citing CMDGA
Annotation Matrix
Click or enter search terms to filter the experiments included in the matrix.
Annotation type
80
candidate regulatory elements
45
chromatin state
45
target gene predictions
41
accessible chromatin
36
gene expression
24
binding sites
18
differential activity
15
histone modifications
15
variant allelic effects
9
Fine-mapped variants
6
eQTL
3
caQTL
Date released
108
September, 2022
82
February, 2021
35
September, 2023
17
February, 2024
16
January, 2020
16
May, 2020
12
March, 2020
9
June, 2020
7
November, 2021
October, 2022
5
February, 2020
4
February, 2023
4
March, 2023
4
May, 2021
3
April, 2020
3
January, 2022
3
November, 2019
2
January, 2021
2
October, 2019
1
August, 2017
1
August, 2021
1
March, 2024
1
May, 2019
1
May, 2022
Available data
222
bed bed3+
64
tsv
43
bed bed9
33
bigWig
8
bigBed bed9
2
txt
1
bed bed9+
Organism
337
Homo sapiens
Biosample type
217
primary cell
86
tissue
26
cell line
8
in vitro differentiated cells
Organ
943
epithelium
650
kidney
460
brain
448
connective tissue
372
musculature of body
307
lung
288
intestine
277
pancreas
262
vasculature
255
heart
244
limb
214
embryo
202
blood vessel
200
skin of body
199
bodily fluid
188
blood
173
large intestine
155
liver
145
extraembryonic component
119
stomach
107
eye
89
adipose tissue
88
bone element
84
mammary gland
84
small intestine
82
uterus
78
prostate gland
74
artery
73
adrenal gland
72
placenta
64
ureter
62
penis
60
lymph node
49
gonad
49
thymus
45
esophagus
42
spinal cord
34
spleen
25
nerve
25
testis
24
lymphoid tissue
23
ovary
23
thyroid gland
22
vein
21
lymphatic vessel
19
mouth
18
skeleton
16
bronchus
13
bone marrow
13
breast
13
pituitary gland
10
tongue
10
urinary bladder
10
vagina
5
trachea
4
nose
1
pericardium
Project
290
AMP
35
KPMP
7
ENCODE
3
LungMap
2
T1D
Genome assembly (visualization)
275
hg19
99
GRCh38
month_released!
October, 2022
BIOSAMPLE
TYPE
337 results
search-icon
table-tab-icon
Clear Filters
candidate regulatory elements
chromatin state
target gene predictions
accessible chromatin
gene expression
binding sites
differential activity
histone modifications
variant allelic effects
Fine-mapped variants
eQTL
caQTL
primary cell
endothelial cell of umbilical vein
6
5
4
2
1
1
foreskin keratinocyte
11
4
4
endothelial cell of hepatic sinusoid
6
4
6
foreskin fibroblast
6
1
2
1
2
2
dermis blood vessel endothelial cell
6
2
2
+ See 34 more…
tissue
coronary artery
3
3
3
3
1
2
3
2
1
tibial artery
3
3
2
3
1
2
3
2
ascending aorta
4
3
2
1
1
1
3
1
aorta
4
4
4
1
thoracic aorta
4
3
2
1
1
+ See 5 more…
cell line
EH
2
1
1
EL
2
1
1
ELR
2
1
1
smooth muscle cell of the coronary artery
1
1
1
1
choroid plexus epithelial cell
1
1
1
+ See 3 more…
in vitro differentiated cells
foreskin keratinocyte
1
1
1
foreskin melanocyte
1
1
1
dermis microvascular lymphatic vessel endothelial cell
1
1
See all biosamples
Download