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Schema
Citing CMDGA
Annotation Matrix
Click or enter search terms to filter the experiments included in the matrix.
Annotation type
136
candidate regulatory elements
92
target gene predictions
87
chromatin state
57
accessible chromatin
54
histone modifications
36
Fine-mapped variants
eQTL
24
binding sites
23
gene expression
17
variant allelic effects
Date released
222
September, 2022
146
February, 2021
38
March, 2020
29
January, 2020
26
June, 2020
20
May, 2020
11
May, 2021
7
October, 2022
6
August, 2017
6
February, 2020
4
May, 2019
3
September, 2023
2
January, 2021
1
February, 2024
1
January, 2022
1
March, 2024
1
May, 2022
1
November, 2019
1
November, 2021
Available data
379
bed bed3+
80
bed bed9
59
tsv
31
bigWig
6
bigBed bed9
1
bed bed9+
Organism
526
Homo sapiens
Biosample type
342
tissue
130
cell line
49
primary cell
4
in vitro differentiated cells
1
stem cell
Organ
946
epithelium
648
kidney
439
connective tissue
437
brain
368
musculature of body
310
lung
286
intestine
262
pancreas
260
vasculature
249
heart
239
limb
216
bodily fluid
215
embryo
205
blood
201
skin of body
198
blood vessel
172
large intestine
148
liver
145
extraembryonic component
118
stomach
108
eye
89
bone element
87
mammary gland
83
small intestine
82
uterus
77
prostate gland
76
adipose tissue
72
adrenal gland
72
placenta
70
artery
64
penis
64
ureter
62
lymph node
49
thymus
47
gonad
42
esophagus
41
spinal cord
33
spleen
24
lymphoid tissue
24
testis
23
nerve
23
vein
22
ovary
22
thyroid gland
21
lymphatic vessel
18
mouth
18
skeleton
16
bronchus
13
bone marrow
12
breast
12
pituitary gland
10
tongue
10
urinary bladder
9
vagina
5
trachea
4
nose
1
pericardium
Project
523
AMP
2
T1D
1
ENCODE
Genome assembly (visualization)
496
hg19
146
GRCh38
annotation_type!
eQTL
BIOSAMPLE
TYPE
526 results
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Clear Filters
candidate regulatory elements
target gene predictions
chromatin state
accessible chromatin
histone modifications
Fine-mapped variants
binding sites
gene expression
variant allelic effects
tissue
brain
29
16
18
2
3
1
1
1
caudate nucleus
5
3
4
2
1
3
1
1
layer of hippocampus
6
3
4
1
1
substantia nigra
5
2
3
1
3
1
cerebellum
3
2
2
1
1
3
2
+ See 67 more…
cell line
SK-N-DZ
4
2
2
1
1
SK-N-SH
4
3
2
1
pituitary stalk
10
SK-N-MC
2
1
1
1
1
2
BE(2)-C
1
1
1
1
1
2
+ See 20 more…
primary cell
choroid plexus epithelial cell
2
1
1
1
1
1
astrocyte of the cerebellum
2
1
1
1
1
astrocyte of the hippocampus
2
1
1
1
1
cardiac fibroblast
3
2
brain microvascular endothelial cell
2
1
1
1
+ See 10 more…
in vitro differentiated cells
hippocampal neuron
1
1
ESC dervived hypothalamic neuron (arcuate nucleus)
1
ESC dervived hypothalamic progenitor (arcuate nucleus)
1
stem cell
undifferentiated ESC (H9 cell line)
1
See all biosamples
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