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Schema
Citing CMDGA
Annotation Matrix
Click or enter search terms to filter the experiments included in the matrix.
Annotation type
113
candidate regulatory elements
79
target gene predictions
74
chromatin state
50
histone modifications
44
accessible chromatin
36
Fine-mapped variants
29
eQTL
19
gene expression
18
binding sites
variant allelic effects
Date released
183
September, 2022
115
February, 2021
38
March, 2020
29
January, 2020
21
June, 2020
18
February, 2020
18
January, 2022
11
May, 2021
6
August, 2017
6
October, 2022
4
May, 2019
3
May, 2020
3
September, 2023
2
January, 2021
1
February, 2024
1
March, 2024
1
May, 2022
1
November, 2019
1
November, 2021
Available data
310
bed bed3+
67
bed bed9
67
tsv
23
bigWig
6
bigBed bed9
1
bed bed9+
Organism
461
Homo sapiens
Biosample type
339
tissue
77
cell line
41
primary cell
4
in vitro differentiated cells
1
stem cell
Organ
908
epithelium
636
kidney
449
brain
442
connective tissue
368
musculature of body
310
lung
286
intestine
266
pancreas
251
vasculature
245
heart
236
limb
218
bodily fluid
215
embryo
207
blood
203
skin of body
195
blood vessel
174
large intestine
152
liver
146
extraembryonic component
117
stomach
107
eye
89
bone element
86
adipose tissue
86
mammary gland
84
small intestine
83
uterus
77
prostate gland
73
placenta
72
adrenal gland
71
artery
64
penis
62
lymph node
61
ureter
50
gonad
49
thymus
43
esophagus
43
spinal cord
34
spleen
26
testis
24
lymphoid tissue
23
nerve
23
ovary
22
thyroid gland
22
vein
21
lymphatic vessel
19
mouth
18
skeleton
15
bronchus
13
bone marrow
13
breast
13
pituitary gland
10
tongue
10
urinary bladder
10
vagina
5
trachea
4
nose
1
pericardium
Project
459
AMP
2
T1D
1
ENCODE
Genome assembly (visualization)
426
hg19
154
GRCh38
annotation_type!
variant allelic effects
BIOSAMPLE
TYPE
462 results
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Clear Filters
candidate regulatory elements
target gene predictions
chromatin state
histone modifications
accessible chromatin
Fine-mapped variants
eQTL
gene expression
binding sites
tissue
brain
29
16
18
3
2
2
1
1
caudate nucleus
5
3
4
1
2
3
2
1
substantia nigra
5
2
3
1
3
3
1
cerebellum
3
2
2
1
1
3
2
2
layer of hippocampus
6
3
4
1
1
1
+ See 56 more…
cell line
SK-N-DZ
4
2
2
1
1
SK-N-SH
4
3
2
1
pituitary stalk
10
SK-N-MC
2
1
1
1
1
2
BE(2)-C
1
1
1
1
1
2
+ See 9 more…
primary cell
choroid plexus epithelial cell
2
1
1
1
1
astrocyte of the cerebellum
2
1
1
1
astrocyte of the hippocampus
2
1
1
1
brain microvascular endothelial cell
2
1
1
1
megakaryocyte
2
2
+ See 8 more…
in vitro differentiated cells
hippocampal neuron
1
1
ESC dervived hypothalamic neuron (arcuate nucleus)
1
ESC dervived hypothalamic progenitor (arcuate nucleus)
1
stem cell
undifferentiated ESC (H9 cell line)
1
See all biosamples
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