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Schema
Citing CMDGA
Annotation Matrix
Click or enter search terms to filter the experiments included in the matrix.
Annotation type
272
gene expression
251
accessible chromatin
207
candidate regulatory elements
196
target gene predictions
123
chromatin state
92
differential activity
75
histone modifications
57
binding sites
variant allelic effects
36
Fine-mapped variants
32
eQTL
2
caQTL
Date released
325
September, 2022
301
February, 2021
158
September, 2023
127
November, 2021
51
February, 2024
45
June, 2020
45
May, 2021
44
March, 2020
41
January, 2020
38
March, 2023
27
February, 2020
23
August, 2021
20
January, 2021
18
January, 2022
15
November, 2022
12
February, 2023
11
October, 2022
9
August, 2017
7
April, 2020
6
August, 2018
5
October, 2019
4
May, 2019
3
March, 2024
3
May, 2020
2
May, 2022
2
November, 2019
1
July, 2020
Available data
796
bed bed3+
391
tsv
191
bigWig
114
bed bed9
78
txt
10
bigBed narrowPeak
8
bigBed bed9
6
csv
3
bam
3
bed gappedPeak
3
xls
Organism
1342
Homo sapiens
Biosample type
797
primary cell
400
tissue
115
cell line
30
in vitro differentiated cells
1
stem cell
Organ
908
epithelium
636
kidney
449
brain
442
connective tissue
368
musculature of body
310
lung
286
intestine
266
pancreas
251
vasculature
245
heart
236
limb
218
bodily fluid
215
embryo
207
blood
203
skin of body
195
blood vessel
174
large intestine
152
liver
146
extraembryonic component
117
stomach
107
eye
89
bone element
86
adipose tissue
86
mammary gland
84
small intestine
83
uterus
77
prostate gland
73
placenta
72
adrenal gland
71
artery
64
penis
62
lymph node
61
ureter
50
gonad
49
thymus
43
esophagus
43
spinal cord
34
spleen
26
testis
24
lymphoid tissue
23
nerve
23
ovary
22
thyroid gland
22
vein
21
lymphatic vessel
19
mouth
18
skeleton
15
bronchus
13
bone marrow
13
breast
13
pituitary gland
10
tongue
10
urinary bladder
10
vagina
5
trachea
4
nose
1
pericardium
Project
1032
AMP
155
KPMP
127
ENCODE
20
T1D
7
LungMap
2
community
Genome assembly (visualization)
961
hg19
382
GRCh38
annotation_type!
variant allelic effects
BIOSAMPLE
TYPE
1343 results
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Clear Filters
gene expression
accessible chromatin
candidate regulatory elements
target gene predictions
chromatin state
differential activity
histone modifications
binding sites
Fine-mapped variants
eQTL
caQTL
primary cell
endothelial cell
9
15
7
1
2
1
2
hepatocyte
13
8
1
3
1
4
1
epithelial cell of proximal tubule
16
1
2
1
1
1
glomerular endothelial cell
14
2
2
1
1
endothelial cell of umbilical vein
2
6
4
5
2
+ See 146 more…
tissue
brain
1
2
29
16
18
3
1
2
caudate nucleus
1
2
5
3
4
1
3
2
pigmented layer of retina
20
substantia nigra
1
5
2
3
1
3
3
cerebellum
2
1
3
2
2
1
3
2
+ See 76 more…
cell line
EndoC_BH1
8
8
1
3
SK-N-DZ
1
4
2
2
1
SK-N-SH
4
3
2
1
pituitary stalk
10
SK-N-MC
1
2
1
1
1
2
+ See 19 more…
in vitro differentiated cells
retinal pigment epithelial cell
6
hepatocyte
2
1
1
foreskin keratinocyte
1
1
1
hepatocyte(AFP)
3
mammary gland epithelial cell
1
1
1
+ See 7 more…
stem cell
undifferentiated ESC (H9 cell line)
1
See all biosamples
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