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Schema
Citing CMDGA
Annotation Matrix
Click or enter search terms to filter the experiments included in the matrix.
Annotation type
312
accessible chromatin
310
gene expression
277
candidate regulatory elements
259
target gene predictions
162
chromatin state
106
differential activity
94
histone modifications
81
binding sites
67
variant allelic effects
53
eQTL
42
Fine-mapped variants
4
caQTL
2
pQTL
Date released
430
September, 2022
393
February, 2021
177
November, 2021
171
September, 2023
87
February, 2024
58
June, 2020
53
May, 2021
52
March, 2020
46
January, 2020
45
March, 2023
37
May, 2020
36
February, 2020
34
August, 2021
23
January, 2022
22
January, 2021
22
October, 2022
13
February, 2023
12
August, 2017
10
April, 2020
10
November, 2022
7
August, 2018
6
October, 2019
5
May, 2022
4
May, 2019
3
March, 2024
3
November, 2020
2
May, 2024
2
November, 2019
2
September, 2018
1
January, 2018
1
July, 2020
1
June, 2021
Available data
1098
bed bed3+
445
tsv
241
bigWig
150
bed bed9
85
txt
15
bigBed narrowPeak
10
bigBed bed9
3
bam
3
bed gappedPeak
3
xls
Organism
1768
Homo sapiens
Biosample type
1115
primary cell
505
tissue
147
cell line
in vitro differentiated cells
2
stem cell
Organ
923
epithelium
651
kidney
462
brain
410
connective tissue
373
musculature of body
311
lung
289
intestine
274
pancreas
264
vasculature
254
heart
244
limb
218
bodily fluid
207
blood
204
blood vessel
195
skin of body
185
embryo
174
large intestine
149
liver
141
extraembryonic component
119
stomach
103
eye
89
bone element
88
adipose tissue
84
mammary gland
84
small intestine
83
uterus
78
prostate gland
75
artery
73
adrenal gland
73
placenta
64
ureter
62
lymph node
58
penis
50
gonad
49
thymus
45
esophagus
43
spinal cord
34
spleen
26
testis
25
nerve
24
lymphoid tissue
23
ovary
23
thyroid gland
23
vein
19
lymphatic vessel
19
mouth
18
skeleton
16
bronchus
13
bone marrow
13
breast
13
pituitary gland
10
tongue
10
urinary bladder
10
vagina
5
trachea
1
pericardium
Project
1382
AMP
177
ENCODE
170
KPMP
22
T1D
10
LungMap
4
ITG
4
community
Genome assembly (visualization)
1315
hg19
494
GRCh38
2
hg18
biosample_type!
in vitro differentiated cells
BIOSAMPLE
TYPE
1769 results
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Clear Filters
accessible chromatin
gene expression
candidate regulatory elements
target gene predictions
chromatin state
differential activity
histone modifications
binding sites
variant allelic effects
eQTL
Fine-mapped variants
caQTL
pQTL
primary cell
endothelial cell
15
9
7
1
2
2
1
2
hepatocyte
8
13
1
3
1
4
1
2
fibroblast
16
4
1
6
2
epithelial cell of proximal tubule
1
16
2
1
1
1
1
pericyte cell
10
1
10
1
+ See 198 more…
tissue
brain
2
1
29
16
18
3
1
1
2
adipose tissue
2
3
7
8
6
1
1
4
caudate nucleus
2
1
5
3
4
1
1
2
3
subcutaneous adipose tissue
2
5
2
1
1
1
6
3
pigmented layer of retina
20
+ See 87 more…
cell line
EndoC_BH1
8
8
1
3
1
SK-N-DZ
1
4
2
2
1
SK-N-SH
4
3
2
1
pituitary stalk
10
SK-N-MC
1
2
1
1
1
2
+ See 30 more…
stem cell
mesenchymal stem cell
1
undifferentiated ESC (H9 cell line)
1
See all biosamples
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