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Schema
Citing CMDGA
Annotation Matrix
Click or enter search terms to filter the experiments included in the matrix.
Annotation type
210
candidate regulatory elements
155
target gene predictions
125
chromatin state
117
accessible chromatin
76
histone modifications
66
gene expression
51
binding sites
51
eQTL
42
Fine-mapped variants
29
variant allelic effects
14
differential activity
2
caQTL
2
pQTL
Date released
327
September, 2022
236
February, 2021
50
November, 2021
46
March, 2020
42
June, 2020
34
January, 2020
27
February, 2020
24
January, 2022
24
May, 2020
23
May, 2021
18
February, 2024
17
October, 2022
16
September, 2023
11
August, 2021
9
August, 2017
7
March, 2023
4
May, 2019
3
April, 2020
3
May, 2022
3
November, 2020
2
January, 2021
2
March, 2024
2
May, 2024
2
September, 2018
1
August, 2018
1
February, 2023
1
January, 2018
1
June, 2021
1
November, 2019
1
November, 2022
1
October, 2019
Available data
645
bed bed3+
130
tsv
116
bed bed9
69
bigWig
8
bigBed bed9
7
txt
1
bigBed narrowPeak
Organism
939
Homo sapiens
Biosample type
459
tissue
319
primary cell
160
cell line
in vitro differentiated cells
2
stem cell
Organ
923
epithelium
651
kidney
462
brain
410
connective tissue
373
musculature of body
311
lung
289
intestine
274
pancreas
264
vasculature
254
heart
244
limb
218
bodily fluid
207
blood
204
blood vessel
195
skin of body
185
embryo
174
large intestine
149
liver
141
extraembryonic component
119
stomach
103
eye
89
bone element
88
adipose tissue
84
mammary gland
84
small intestine
83
uterus
78
prostate gland
75
artery
73
adrenal gland
73
placenta
64
ureter
62
lymph node
58
penis
50
gonad
49
thymus
45
esophagus
43
spinal cord
34
spleen
26
testis
25
nerve
24
lymphoid tissue
23
ovary
23
thyroid gland
23
vein
19
lymphatic vessel
19
mouth
18
skeleton
16
bronchus
13
bone marrow
13
breast
13
pituitary gland
10
tongue
10
urinary bladder
10
vagina
5
trachea
1
pericardium
Project
864
AMP
50
ENCODE
15
KPMP
4
ITG
3
LungMap
2
T1D
2
community
Genome assembly (visualization)
825
hg19
279
GRCh38
2
hg18
biosample_type!
in vitro differentiated cells
BIOSAMPLE
TYPE
940 results
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Clear Filters
candidate regulatory elements
target gene predictions
chromatin state
accessible chromatin
histone modifications
gene expression
binding sites
eQTL
Fine-mapped variants
variant allelic effects
differential activity
caQTL
pQTL
tissue
brain
29
16
18
2
3
1
1
2
1
adipose tissue
7
8
6
2
3
1
4
1
caudate nucleus
5
3
4
2
1
1
2
3
1
subcutaneous adipose tissue
2
1
2
5
6
3
1
1
omental fat pad
5
2
2
2
2
2
3
+ See 69 more…
primary cell
fibroblast
4
16
1
2
6
pericyte cell
1
10
1
10
osteoblast
2
2
1
5
2
2
3
fibroblast of lung
6
4
4
2
foreskin fibroblast
6
2
1
1
2
4
+ See 52 more…
cell line
22Rv1
4
2
2
1
1
SK-N-DZ
4
2
2
1
1
SK-N-SH
4
3
2
1
pituitary stalk
10
SK-N-MC
2
1
1
1
1
2
+ See 30 more…
stem cell
mesenchymal stem cell
1
undifferentiated ESC (H9 cell line)
1
See all biosamples
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