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Schema
Citing CMDGA
Annotation Matrix
Click or enter search terms to filter the experiments included in the matrix.
Annotation type
83
candidate regulatory elements
81
accessible chromatin
79
target gene predictions
45
chromatin state
37
binding sites
31
gene expression
25
histone modifications
15
variant allelic effects
12
differential activity
6
eQTL
2
caQTL
Date released
129
September, 2022
96
February, 2021
50
November, 2021
26
June, 2020
18
May, 2021
17
October, 2022
15
September, 2023
13
February, 2024
9
January, 2020
9
May, 2020
7
March, 2023
5
February, 2020
3
April, 2020
3
January, 2022
3
May, 2022
3
November, 2020
2
January, 2021
2
May, 2024
1
August, 2017
1
August, 2018
1
August, 2021
1
February, 2023
1
June, 2021
1
October, 2019
Available data
323
bed bed3+
50
bigWig
44
bed bed9
37
tsv
7
txt
1
bigBed bed9
1
bigBed narrowPeak
Organism
416
Homo sapiens
Biosample type
444
tissue
309
primary cell
107
cell line
54
in vitro differentiated cells
2
stem cell
Organ
862
epithelium
350
kidney
314
connective tissue
214
bodily fluid
204
blood
180
vasculature
170
skin of body
160
pancreas
149
embryo
130
lung
120
blood vessel
112
brain
91
liver
82
mammary gland
70
uterus
67
bone element
67
musculature of body
63
prostate gland
62
lymph node
57
intestine
56
penis
43
extraembryonic component
40
heart
40
large intestine
33
artery
33
eye
22
vein
19
lymphatic vessel
16
bronchus
13
bone marrow
13
placenta
11
adrenal gland
11
gonad
11
stomach
10
esophagus
10
pituitary gland
8
limb
8
mouth
8
testis
7
spinal cord
6
lymphoid tissue
5
trachea
4
adipose tissue
4
small intestine
3
thyroid gland
2
ovary
1
pericardium
1
thymus
Project
344
AMP
50
ENCODE
15
KPMP
3
LungMap
2
T1D
2
community
Genome assembly (visualization)
368
hg19
112
GRCh38
BIOSAMPLE
TYPE
416 results
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Clear Filters
candidate regulatory elements
accessible chromatin
target gene predictions
chromatin state
binding sites
gene expression
histone modifications
variant allelic effects
differential activity
eQTL
caQTL
primary cell
fibroblast
16
4
1
6
2
pericyte cell
1
10
10
1
osteoblast
2
5
2
1
3
2
2
fibroblast of lung
6
4
4
2
foreskin fibroblast
6
1
2
1
4
2
fibroblast of cardiac tissue
3
2
4
3
fibroblast of dermis
4
4
3
1
hepatic stellate cell
1
3
1
1
1
1
1
skin fibroblast
2
2
3
2
fibroblast of mammary gland
2
1
1
1
2
1
fibroblast of pulmonary artery
2
1
1
1
2
1
fibroblast of villous mesenchyme
2
1
1
1
2
1
pancreatic stellate cell
2
1
2
3
choroid plexus epithelial cell
2
1
1
1
1
1
mesangial cell
2
5
mesenchymal stem cell
1
2
1
1
1
1
astrocyte of the cerebellum
2
1
1
1
1
astrocyte of the hippocampus
2
1
1
1
1
cardiac fibroblast
3
2
Adaptive / Maladaptive / Repairing Fibroblast
3
2
Fibroblast
3
2
Mesangial Cell
3
2
brain microvascular endothelial cell
2
1
1
1
fibroblast of peridontal ligament
2
1
1
1
fibroblast of the aortic adventitia
2
1
1
1
adipocyte
2
1
1
adult endothelial progenitor cell
1
3
cardiac fibroblast
3
1
fibroblast of gingiva
2
1
1
fibroblast of the conjunctiva
2
1
1
preadipocyte
1
1
2
stromal cell of bone marrow
2
1
1
amnion mesenchymal stem cell
1
1
1
amniotic stem cell
1
1
1
brain pericyte
1
1
1
pancreatic quiescent stellate cell
3
pulmonary interstitial fibroblast
1
1
1
articular chondrocyte
2
columnar chondrocyte
1
1
extracellular matrix secreting cell
2
fat cell
1
1
luteal cell
1
1
stromal cell
1
1
brain microvascular endothelial cell
1
Glioblastoma
1
activated pancreatic stellate cell
1
cardiac atrium fibroblast
1
cardiac ventricle fibroblast
1
dedifferentiated amniotic fluid mesenchymal stem cell
1
fibroblast of arm
1
fibroblast of skin of abdomen
1
kidney interstitial fibroblast
1
mesenchymal stem cell of adipose
1
pericardium fibroblast
1
quiescent pancreatic stellate cell
1
cell line
SK-N-DZ
4
1
2
2
1
SK-N-SH
4
3
2
1
pituitary stalk
10
SK-N-MC
2
1
1
1
2
1
BE(2)-C
1
1
1
1
2
1
GM23248
2
1
1
1
1
1
Daoy
2
1
1
1
1
A172
2
1
1
1
M059J
2
1
1
1
fibroblast of cardiac tissue
2
1
2
H54
2
1
1
HT1080
2
1
1
U-87 MG
1
2
1
choroid plexus epithelial cell
1
1
1
foreskin fibroblast
1
1
1
medulloblastoma
1
1
1
adipose tissue derived mesenchymal stem cell
1
1
chondrocyte
1
1
hepatic stellate cell
1
1
skin fibroblast
1
1
BE2C
1
adipose-derived mesenchymal stem cell
1
brain pericyte
1
fibroblast
1
fibroblast of the conjunctiva
1
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