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Schema
Citing CMDGA
Annotation Matrix
Click or enter search terms to filter the experiments included in the matrix.
Annotation type
136
candidate regulatory elements
92
target gene predictions
81
chromatin state
57
accessible chromatin
54
histone modifications
36
Fine-mapped variants
29
eQTL
24
binding sites
23
gene expression
17
variant allelic effects
Date released
222
September, 2022
146
February, 2021
38
March, 2020
29
January, 2020
26
June, 2020
20
May, 2020
18
February, 2020
18
January, 2022
11
May, 2021
7
October, 2022
August, 2017
4
May, 2019
3
September, 2023
2
January, 2021
1
February, 2024
1
March, 2024
1
May, 2022
1
November, 2019
1
November, 2021
Available data
373
bed bed3+
80
bed bed9
71
tsv
31
bigWig
6
bigBed bed9
1
bed bed9+
Organism
548
Homo sapiens
Biosample type
365
tissue
130
cell line
49
primary cell
4
in vitro differentiated cells
1
stem cell
Organ
946
epithelium
652
kidney
460
brain
451
connective tissue
372
musculature of body
310
lung
285
intestine
274
pancreas
265
vasculature
255
heart
244
limb
216
bodily fluid
214
embryo
205
blood
203
blood vessel
203
skin of body
171
large intestine
153
liver
146
extraembryonic component
118
stomach
109
eye
89
bone element
87
adipose tissue
86
mammary gland
83
small intestine
83
uterus
78
prostate gland
75
artery
73
adrenal gland
73
placenta
64
penis
64
ureter
62
lymph node
50
gonad
49
thymus
45
esophagus
43
spinal cord
34
spleen
26
testis
25
nerve
24
lymphoid tissue
23
ovary
23
thyroid gland
22
vein
21
lymphatic vessel
19
mouth
18
skeleton
16
bronchus
13
bone marrow
13
breast
13
pituitary gland
10
tongue
10
urinary bladder
10
vagina
5
trachea
4
nose
1
pericardium
Project
546
AMP
2
T1D
1
ENCODE
Genome assembly (visualization)
502
hg19
175
GRCh38
month_released!
August, 2017
BIOSAMPLE
TYPE
549 results
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Clear Filters
candidate regulatory elements
target gene predictions
chromatin state
accessible chromatin
histone modifications
Fine-mapped variants
eQTL
binding sites
gene expression
variant allelic effects
tissue
brain
29
16
18
2
3
2
1
1
1
caudate nucleus
5
3
3
2
1
3
2
1
1
substantia nigra
5
2
2
1
3
3
1
cerebellum
3
2
2
1
1
3
2
2
frontal cortex
2
2
2
2
3
2
2
1
+ See 67 more…
cell line
SK-N-DZ
4
2
2
1
1
SK-N-SH
4
3
2
1
pituitary stalk
10
SK-N-MC
2
1
1
1
1
2
BE(2)-C
1
1
1
1
1
2
+ See 20 more…
primary cell
choroid plexus epithelial cell
2
1
1
1
1
1
astrocyte of the cerebellum
2
1
1
1
1
astrocyte of the hippocampus
2
1
1
1
1
cardiac fibroblast
3
2
brain microvascular endothelial cell
2
1
1
1
+ See 10 more…
in vitro differentiated cells
hippocampal neuron
1
1
ESC dervived hypothalamic neuron (arcuate nucleus)
1
ESC dervived hypothalamic progenitor (arcuate nucleus)
1
stem cell
undifferentiated ESC (H9 cell line)
1
See all biosamples
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