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Schema
Citing CMDGA
Annotation Matrix
Click or enter search terms to filter the experiments included in the matrix.
Annotation type
173
target gene predictions
119
accessible chromatin
114
chromatin state
96
candidate regulatory elements
61
gene expression
45
eQTL
41
Fine-mapped variants
33
differential activity
27
variant allelic effects
26
binding sites
2
sQTL
2
variant to gene
Date released
293
September, 2022
February, 2021
54
February, 2024
48
May, 2021
47
March, 2020
47
March, 2023
37
June, 2020
33
January, 2020
25
May, 2020
25
October, 2022
22
January, 2022
20
February, 2020
20
January, 2021
18
November, 2021
11
August, 2017
10
August, 2021
7
August, 2018
6
October, 2019
4
May, 2019
3
November, 2019
3
September, 2023
2
March, 2024
1
April, 2019
1
February, 2023
1
January, 2018
1
June, 2021
Available data
446
bed bed3+
137
tsv
102
bed bed9
75
bigWig
11
bigBed narrowPeak
8
bigBed bed9
3
bam
3
bed gappedPeak
3
csv
3
xls
Organism
738
Homo sapiens
Biosample type
360
tissue
221
cell line
150
primary cell
7
in vitro differentiated cells
1
stem cell
Organ
753
epithelium
464
kidney
356
brain
351
connective tissue
283
musculature of body
246
pancreas
241
lung
218
intestine
217
vasculature
207
heart
186
limb
168
blood vessel
162
embryo
144
bodily fluid
137
blood
136
skin of body
130
liver
128
large intestine
113
extraembryonic component
92
eye
90
stomach
73
uterus
66
adipose tissue
66
small intestine
60
artery
59
adrenal gland
59
mammary gland
55
placenta
53
bone element
49
prostate gland
46
ureter
38
gonad
38
thymus
36
penis
35
esophagus
35
lymph node
34
spinal cord
24
spleen
22
nerve
19
lymphoid tissue
19
ovary
19
thyroid gland
18
testis
16
lymphatic vessel
16
vein
15
mouth
12
pituitary gland
11
bronchus
10
breast
9
skeleton
9
urinary bladder
8
bone marrow
8
tongue
8
vagina
4
nose
1
pericardium
1
trachea
Project
699
AMP
20
T1D
18
ENCODE
2
community
Genome assembly (visualization)
611
hg19
264
GRCh38
month_released!
February, 2021
BIOSAMPLE
TYPE
739 results
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Clear Filters
target gene predictions
accessible chromatin
chromatin state
candidate regulatory elements
gene expression
eQTL
Fine-mapped variants
differential activity
variant allelic effects
binding sites
sQTL
variant to gene
tissue
brain
16
2
18
16
1
2
1
islet of Langerhans
1
6
3
5
12
2
1
1
2
2
body of pancreas
5
4
4
2
1
3
1
caudate nucleus
3
2
4
3
1
2
3
1
pancreas
5
5
3
2
1
1
+ See 40 more…
cell line
K562
23
1
7
6
1
EndoC_BH1
1
8
8
3
1
GM12878
8
1
2
1
1
pituitary stalk
10
SK-N-SH
3
2
2
1
+ See 37 more…
primary cell
pancreatic beta cell
2
8
3
3
1
pancreatic acinar cell
3
6
3
3
1
pancreatic delta cell
4
5
3
3
1
pancreatic ductal cell
3
6
3
3
1
pancreatic alpha cell
2
7
3
3
+ See 22 more…
in vitro differentiated cells
pancreatic ductal cell
3
hippocampal neuron
1
1
ESC dervived hypothalamic neuron (arcuate nucleus)
1
ESC dervived hypothalamic progenitor (arcuate nucleus)
1
stem cell
undifferentiated ESC (H9 cell line)
1
See all biosamples
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