Toggle navigation
Home
About
Project overview
Policies
News
Contact
Data
Experiments
Annotations
Single Cell Embeddings
Statistical Models
Gene Perturbations
Data Standards & QC
Pipelines
Consortia
Publications
Tools
Single Cell Browser
Help
Getting started
Schema
Citing CMDGA
Annotation Matrix
Click or enter search terms to filter the experiments included in the matrix.
Annotation type
135
candidate regulatory elements
120
target gene predictions
103
accessible chromatin
54
histone modifications
21
binding sites
21
variant allelic effects
10
chromatin state
1
eQTL
1
sQTL
Date released
151
September, 2022
133
February, 2021
26
May, 2021
25
June, 2020
21
January, 2020
20
February, 2024
20
January, 2021
18
May, 2020
18
November, 2021
9
August, 2017
6
March, 2020
6
October, 2019
6
October, 2022
3
September, 2023
November, 2019
1
April, 2019
1
August, 2021
1
January, 2022
1
June, 2021
Available data
466
bed bed3+
143
tsv
78
bed bed9
76
bigWig
14
bigBed narrowPeak
7
bigBed bed9
3
bam
3
bed gappedPeak
3
csv
3
xls
Organism
466
Homo sapiens
Biosample type
276
tissue
101
primary cell
85
cell line
3
in vitro differentiated cells
1
stem cell
Organ
546
epithelium
330
connective tissue
309
brain
309
kidney
281
musculature of body
239
lung
228
intestine
190
bodily fluid
181
blood
178
embryo
173
limb
170
heart
165
skin of body
160
vasculature
157
pancreas
137
large intestine
120
blood vessel
112
extraembryonic component
100
liver
98
eye
93
stomach
76
uterus
73
mammary gland
70
bone element
64
small intestine
63
prostate gland
57
adrenal gland
56
placenta
54
lymph node
54
penis
51
ureter
49
adipose tissue
44
artery
38
thymus
37
gonad
33
esophagus
29
spinal cord
25
spleen
19
testis
18
lymphoid tissue
17
ovary
17
thyroid gland
17
vein
15
skeleton
14
bronchus
14
lymphatic vessel
13
mouth
13
nerve
11
bone marrow
11
pituitary gland
9
breast
7
tongue
7
urinary bladder
6
vagina
5
trachea
3
nose
Project
428
AMP
20
T1D
18
ENCODE
Genome assembly (visualization)
466
hg19
59
GRCh38
month_released!
November, 2019
BIOSAMPLE
TYPE
466 results
search-icon
table-tab-icon
Clear Filters
candidate regulatory elements
target gene predictions
accessible chromatin
histone modifications
binding sites
variant allelic effects
chromatin state
eQTL
sQTL
tissue
brain
29
16
2
3
1
1
pancreas
5
5
5
1
1
1
1
islet of Langerhans
1
5
1
2
1
3
1
1
body of pancreas
8
5
1
caudate nucleus
5
3
2
1
1
+ See 62 more…
primary cell
pancreatic beta cell
3
8
1
pancreatic ductal cell
3
5
2
1
1
pancreatic alpha cell
3
7
1
pancreatic delta cell
4
5
1
pancreatic acinar cell
3
5
1
+ See 15 more…
cell line
pituitary stalk
10
EndoC_BH1
1
7
1
SK-N-DZ
4
2
1
1
SK-N-SH
4
3
1
SK-N-MC
2
1
1
1
2
+ See 15 more…
in vitro differentiated cells
ESC dervived hypothalamic neuron (arcuate nucleus)
1
ESC dervived hypothalamic progenitor (arcuate nucleus)
1
hippocampal neuron
1
stem cell
undifferentiated ESC (H9 cell line)
1
See all biosamples
Download