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Schema
Citing CMDGA
Annotation Matrix
Click or enter search terms to filter the experiments included in the matrix.
Annotation type
139
candidate regulatory elements
97
target gene predictions
49
accessible chromatin
48
histone modifications
16
binding sites
11
variant allelic effects
6
chromatin state
Date released
148
September, 2022
123
February, 2021
22
June, 2020
18
January, 2020
13
May, 2021
12
May, 2020
10
November, 2021
6
August, 2017
6
October, 2022
3
March, 2020
3
September, 2023
1
February, 2024
1
January, 2022
Available data
366
bed bed3+
80
bed bed9
68
tsv
27
bigWig
6
bigBed bed9
Organism
366
Homo sapiens
Biosample type
254
tissue
66
cell line
42
primary cell
3
in vitro differentiated cells
1
stem cell
Organ
547
epithelium
330
connective tissue
309
brain
309
kidney
281
musculature of body
239
lung
228
intestine
190
bodily fluid
181
blood
178
embryo
175
limb
173
heart
165
skin of body
163
vasculature
159
pancreas
137
large intestine
123
blood vessel
112
extraembryonic component
101
liver
98
eye
93
stomach
76
uterus
73
mammary gland
70
bone element
64
small intestine
63
prostate gland
57
adrenal gland
56
placenta
54
lymph node
54
penis
51
ureter
49
adipose tissue
46
artery
38
thymus
37
gonad
33
esophagus
29
spinal cord
26
spleen
19
testis
18
lymphoid tissue
17
ovary
17
thyroid gland
17
vein
15
skeleton
14
bronchus
14
lymphatic vessel
14
nerve
13
mouth
11
bone marrow
11
pituitary gland
9
breast
7
tongue
7
urinary bladder
6
vagina
5
trachea
3
nose
Project
356
AMP
10
ENCODE
Genome assembly (visualization)
366
hg19
31
GRCh38
BIOSAMPLE
TYPE
366 results
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candidate regulatory elements
target gene predictions
accessible chromatin
histone modifications
binding sites
variant allelic effects
chromatin state
tissue
brain
29
16
2
3
1
1
adrenal gland
28
17
1
caudate nucleus
5
3
2
1
1
layer of hippocampus
6
3
1
1
1
substantia nigra
5
2
1
1
+ See 52 more…
cell line
pituitary stalk
10
SK-N-DZ
4
2
1
1
SK-N-SH
4
3
1
SK-N-MC
2
1
1
1
2
BE(2)-C
1
1
1
1
2
+ See 9 more…
primary cell
choroid plexus epithelial cell
2
1
1
1
1
cortical cell of adrenal gland
2
3
1
cardiac fibroblast
3
2
astrocyte of the cerebellum
2
1
1
1
astrocyte of the hippocampus
2
1
1
1
+ See 8 more…
in vitro differentiated cells
ESC dervived hypothalamic neuron (arcuate nucleus)
1
ESC dervived hypothalamic progenitor (arcuate nucleus)
1
hippocampal neuron
1
stem cell
undifferentiated ESC (H9 cell line)
1
See all biosamples
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