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Schema
Citing CMDGA
Annotation Matrix
Click or enter search terms to filter the experiments included in the matrix.
Annotation type
227
candidate regulatory elements
177
target gene predictions
135
chromatin state
78
histone modifications
68
binding sites
64
accessible chromatin
36
Fine-mapped variants
33
eQTL
22
gene expression
17
variant allelic effects
1
pQTL
Date released
353
September, 2022
230
February, 2021
40
June, 2020
39
March, 2020
32
February, 2024
29
January, 2020
26
October, 2022
20
January, 2022
20
May, 2021
19
May, 2020
18
February, 2020
11
August, 2017
6
November, 2021
4
March, 2024
4
May, 2019
3
August, 2021
3
September, 2023
1
November, 2019
Available data
636
bed bed3+
124
bed bed9
70
tsv
24
bigWig
6
bigBed bed9
Organism
857
Homo sapiens
Biosample type
487
tissue
316
cell line
50
primary cell
4
in vitro differentiated cells
1
stem cell
Organ
949
epithelium
652
kidney
466
brain
458
connective tissue
375
musculature of body
311
lung
289
intestine
277
pancreas
266
vasculature
255
heart
244
limb
218
bodily fluid
215
embryo
207
blood
204
blood vessel
204
skin of body
174
large intestine
156
liver
146
extraembryonic component
119
stomach
109
eye
89
adipose tissue
89
bone element
87
mammary gland
84
small intestine
83
uterus
78
prostate gland
75
artery
73
adrenal gland
73
placenta
64
penis
64
ureter
62
lymph node
50
gonad
49
thymus
45
esophagus
43
spinal cord
34
spleen
26
testis
25
nerve
24
lymphoid tissue
23
ovary
23
thyroid gland
23
vein
21
lymphatic vessel
19
mouth
18
skeleton
16
bronchus
13
bone marrow
13
breast
13
pituitary gland
10
tongue
10
urinary bladder
10
vagina
5
trachea
4
nose
1
pericardium
Project
852
AMP
6
ENCODE
Genome assembly (visualization)
810
hg19
248
GRCh38
BIOSAMPLE
TYPE
858 results
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Clear Filters
candidate regulatory elements
target gene predictions
chromatin state
histone modifications
binding sites
accessible chromatin
Fine-mapped variants
eQTL
gene expression
variant allelic effects
pQTL
tissue
brain
29
16
18
3
1
2
2
1
1
large intestine
27
14
13
1
1
sigmoid colon
10
7
5
1
caudate nucleus
5
3
4
1
2
3
2
1
1
transverse colon
8
5
4
1
1
+ See 71 more…
cell line
K562
7
23
7
1
2
1
GM12878
2
8
2
1
2
1
SK-N-DZ
4
2
2
1
1
SK-N-SH
4
3
2
1
pituitary stalk
10
+ See 48 more…
primary cell
choroid plexus epithelial cell
2
1
1
1
1
1
astrocyte of the cerebellum
2
1
1
1
1
astrocyte of the hippocampus
2
1
1
1
1
colon epithelial cell
3
3
peripheral blood mononuclear cell
4
1
1
+ See 7 more…
in vitro differentiated cells
hippocampal neuron
1
1
ESC dervived hypothalamic neuron (arcuate nucleus)
1
ESC dervived hypothalamic progenitor (arcuate nucleus)
1
stem cell
undifferentiated ESC (H9 cell line)
1
See all biosamples
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