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Schema
Citing CMDGA
Annotation Matrix
Click or enter search terms to filter the experiments included in the matrix.
Annotation type
190
candidate regulatory elements
136
target gene predictions
120
chromatin state
93
accessible chromatin
73
histone modifications
68
gene expression
48
eQTL
46
binding sites
42
Fine-mapped variants
30
variant allelic effects
14
differential activity
2
caQTL
2
pQTL
Date released
300
September, 2022
218
February, 2021
47
March, 2020
40
June, 2020
35
January, 2020
27
February, 2020
27
May, 2021
26
May, 2020
24
January, 2022
20
September, 2023
19
February, 2024
17
October, 2022
13
August, 2017
11
August, 2021
7
March, 2023
7
November, 2022
4
May, 2019
3
April, 2020
3
May, 2022
3
November, 2020
2
January, 2021
2
October, 2019
2
September, 2018
1
August, 2018
1
February, 2023
1
January, 2018
1
June, 2021
1
March, 2024
1
November, 2019
Available data
579
bed bed3+
130
tsv
107
bed bed9
40
bigWig
8
bigBed bed9
7
txt
1
bigBed narrowPeak
Organism
863
Homo sapiens
Biosample type
444
tissue
257
primary cell
107
cell line
54
in vitro differentiated cells
2
stem cell
Organ
822
epithelium
649
kidney
466
brain
408
connective tissue
364
musculature of body
302
lung
270
intestine
260
vasculature
259
pancreas
245
heart
244
limb
218
bodily fluid
213
embryo
207
blood
201
blood vessel
194
skin of body
168
large intestine
151
liver
143
extraembryonic component
110
stomach
105
eye
89
adipose tissue
88
bone element
81
mammary gland
81
uterus
80
small intestine
78
prostate gland
75
artery
71
placenta
64
penis
64
ureter
63
adrenal gland
62
lymph node
48
gonad
48
thymus
43
spinal cord
41
esophagus
34
spleen
26
testis
25
nerve
24
lymphoid tissue
23
vein
21
ovary
21
thyroid gland
19
mouth
18
lymphatic vessel
18
skeleton
14
bronchus
13
breast
13
pituitary gland
12
bone marrow
10
tongue
10
urinary bladder
10
vagina
5
trachea
4
nose
1
pericardium
Project
840
AMP
ENCODE
15
KPMP
4
ITG
3
LungMap
2
T1D
Genome assembly (visualization)
750
hg19
220
GRCh38
2
hg18
award.project!
ENCODE
BIOSAMPLE
TYPE
864 results
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Clear Filters
candidate regulatory elements
target gene predictions
chromatin state
accessible chromatin
histone modifications
gene expression
eQTL
binding sites
Fine-mapped variants
variant allelic effects
differential activity
caQTL
pQTL
tissue
brain
29
16
18
2
3
1
2
1
1
adipose tissue
7
8
6
2
3
4
1
1
caudate nucleus
5
3
4
2
1
1
2
3
1
subcutaneous adipose tissue
2
1
2
5
6
3
1
1
omental fat pad
5
2
2
2
2
2
3
+ See 67 more…
primary cell
osteoblast
2
2
1
5
2
2
3
fibroblast of lung
6
4
4
2
foreskin fibroblast
6
2
1
1
2
4
fibroblast of dermis
4
4
3
1
fibroblast
2
2
1
6
+ See 47 more…
cell line
SK-N-DZ
4
2
2
1
1
SK-N-SH
4
3
2
1
pituitary stalk
10
SK-N-MC
2
1
1
1
1
2
BE(2)-C
1
1
1
1
1
2
+ See 20 more…
in vitro differentiated cells
adipocyte
4
6
6
4
1
1
1
mesenchymal stem cell
3
3
2
1
1
1
chondrocyte
5
fibroblast
1
1
hippocampal neuron
1
1
+ See 11 more…
stem cell
mesenchymal stem cell
1
undifferentiated ESC (H9 cell line)
1
See all biosamples
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