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Schema
Citing CMDGA
Annotation Matrix
Click or enter search terms to filter the experiments included in the matrix.
Annotation type
184
candidate regulatory elements
150
target gene predictions
121
accessible chromatin
117
chromatin state
71
histone modifications
65
gene expression
48
eQTL
45
binding sites
42
Fine-mapped variants
30
variant allelic effects
14
differential activity
2
caQTL
2
pQTL
Date released
291
September, 2022
212
February, 2021
47
March, 2020
47
November, 2021
38
June, 2020
35
January, 2020
26
May, 2020
26
May, 2021
25
February, 2020
24
January, 2022
20
September, 2023
19
February, 2024
17
October, 2022
13
August, 2017
11
August, 2021
7
March, 2023
7
November, 2022
4
May, 2019
3
April, 2020
3
May, 2022
3
November, 2020
2
January, 2021
2
October, 2019
2
September, 2018
1
August, 2018
1
February, 2023
1
January, 2018
1
June, 2021
1
March, 2024
1
November, 2019
Available data
612
bed bed3+
129
tsv
104
bed bed9
70
bigWig
8
bigBed bed9
7
txt
1
bigBed narrowPeak
Organism
890
Homo sapiens
Biosample type
444
tissue
290
primary cell
102
cell line
53
in vitro differentiated cells
2
stem cell
Organ
949
epithelium
652
kidney
466
brain
458
connective tissue
375
musculature of body
311
lung
289
intestine
277
pancreas
266
vasculature
heart
244
limb
218
bodily fluid
215
embryo
207
blood
204
blood vessel
204
skin of body
174
large intestine
156
liver
146
extraembryonic component
119
stomach
109
eye
89
adipose tissue
89
bone element
87
mammary gland
84
small intestine
83
uterus
78
prostate gland
75
artery
73
adrenal gland
73
placenta
64
penis
64
ureter
62
lymph node
50
gonad
49
thymus
45
esophagus
43
spinal cord
34
spleen
26
testis
25
nerve
24
lymphoid tissue
23
ovary
23
thyroid gland
23
vein
21
lymphatic vessel
19
mouth
18
skeleton
16
bronchus
13
bone marrow
13
breast
13
pituitary gland
10
tongue
10
urinary bladder
10
vagina
5
trachea
4
nose
1
pericardium
Project
820
AMP
47
ENCODE
15
KPMP
4
ITG
3
LungMap
2
T1D
Genome assembly (visualization)
780
hg19
264
GRCh38
2
hg18
organ_slims!
heart
BIOSAMPLE
TYPE
891 results
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Clear Filters
candidate regulatory elements
target gene predictions
accessible chromatin
chromatin state
histone modifications
gene expression
eQTL
binding sites
Fine-mapped variants
variant allelic effects
differential activity
caQTL
pQTL
tissue
brain
29
16
2
18
3
1
2
1
1
adipose tissue
7
8
2
6
3
4
1
1
caudate nucleus
5
3
2
4
1
1
2
3
1
subcutaneous adipose tissue
2
2
1
5
6
3
1
1
omental fat pad
5
2
2
2
2
2
3
+ See 67 more…
primary cell
fibroblast
4
16
2
1
6
pericyte cell
1
10
10
1
osteoblast
2
2
5
1
2
2
3
fibroblast of lung
6
4
4
2
foreskin fibroblast
6
2
1
1
2
4
+ See 46 more…
cell line
SK-N-DZ
4
2
1
2
1
SK-N-SH
4
3
2
1
pituitary stalk
10
SK-N-MC
2
1
1
1
1
2
BE(2)-C
1
1
1
1
1
2
+ See 19 more…
in vitro differentiated cells
adipocyte
4
6
4
6
1
1
1
mesenchymal stem cell
3
3
1
2
1
1
chondrocyte
5
fibroblast
1
1
hippocampal neuron
1
1
+ See 10 more…
stem cell
mesenchymal stem cell
1
undifferentiated ESC (H9 cell line)
1
See all biosamples
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