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Schema
Citing CMDGA
Annotation Matrix
Click or enter search terms to filter the experiments included in the matrix.
Annotation type
168
candidate regulatory elements
160
target gene predictions
100
chromatin state
59
histone modifications
54
accessible chromatin
36
Fine-mapped variants
29
binding sites
29
eQTL
29
gene expression
17
variant allelic effects
Date released
261
September, 2022
163
February, 2021
52
February, 2024
39
March, 2020
31
June, 2020
29
January, 2020
19
May, 2020
18
February, 2020
18
January, 2022
18
May, 2021
8
August, 2021
7
August, 2017
7
October, 2022
4
May, 2019
3
September, 2023
2
November, 2021
1
March, 2024
1
November, 2019
Available data
487
bed bed3+
93
bed bed9
77
tsv
23
bigWig
6
bigBed bed9
Organism
680
Homo sapiens
Biosample type
384
tissue
204
cell line
57
primary cell
34
in vitro differentiated cells
2
stem cell
Organ
949
epithelium
652
kidney
466
brain
458
connective tissue
375
musculature of body
311
lung
289
intestine
277
pancreas
266
vasculature
255
heart
244
limb
218
bodily fluid
215
embryo
207
blood
204
blood vessel
204
skin of body
174
large intestine
156
liver
146
extraembryonic component
119
stomach
109
eye
89
adipose tissue
89
bone element
87
mammary gland
84
small intestine
83
uterus
78
prostate gland
75
artery
73
adrenal gland
73
placenta
64
penis
64
ureter
62
lymph node
50
gonad
49
thymus
45
esophagus
43
spinal cord
34
spleen
26
testis
25
nerve
24
lymphoid tissue
23
ovary
23
thyroid gland
23
vein
21
lymphatic vessel
19
mouth
18
skeleton
16
bronchus
13
bone marrow
13
breast
13
pituitary gland
10
tongue
10
urinary bladder
10
vagina
5
trachea
4
nose
1
pericardium
Project
679
AMP
2
ENCODE
Genome assembly (visualization)
628
hg19
232
GRCh38
BIOSAMPLE
TYPE
681 results
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Clear Filters
candidate regulatory elements
target gene predictions
chromatin state
histone modifications
accessible chromatin
Fine-mapped variants
binding sites
eQTL
gene expression
variant allelic effects
tissue
brain
29
16
18
3
2
1
2
1
1
caudate nucleus
5
3
4
1
2
3
2
1
1
substantia nigra
5
2
3
1
3
3
1
cerebellum
3
2
2
1
1
3
2
2
chorionic villus
8
4
4
+ See 62 more…
cell line
H1-hESC
1
39
1
1
1
2
8
H9
7
8
1
SK-N-DZ
4
2
2
1
1
SK-N-SH
4
3
2
1
pituitary stalk
10
+ See 28 more…
primary cell
trophoblast cell
7
5
4
1
1
choroid plexus epithelial cell
2
1
1
1
1
1
astrocyte of the cerebellum
2
1
1
1
1
astrocyte of the hippocampus
2
1
1
1
1
cardiac fibroblast
3
2
+ See 8 more…
in vitro differentiated cells
endodermal cell
4
2
2
mesodermal cell
4
1
1
1
trophoblast cell
2
2
1
ectodermal cell
2
1
1
cardiac mesoderm primordium
1
1
1
+ See 6 more…
stem cell
H1-hESC
1
undifferentiated ESC (H9 cell line)
1
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