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Schema
Citing CMDGA
Annotation Matrix
Click or enter search terms to filter the experiments included in the matrix.
Annotation type
218
target gene predictions
177
candidate regulatory elements
104
chromatin state
61
histone modifications
57
accessible chromatin
36
Fine-mapped variants
33
binding sites
31
gene expression
30
eQTL
17
variant allelic effects
Date released
273
September, 2022
173
February, 2021
103
February, 2024
39
March, 2020
33
June, 2020
29
January, 2020
20
May, 2021
19
January, 2022
19
May, 2020
18
February, 2020
8
August, 2021
8
October, 2022
7
August, 2017
4
May, 2019
4
November, 2021
3
March, 2024
3
September, 2023
1
November, 2019
Available data
563
bed bed3+
97
bed bed9
79
tsv
24
bigWig
6
bigBed bed9
Organism
763
Homo sapiens
Biosample type
397
tissue
269
cell line
62
primary cell
34
in vitro differentiated cells
2
stem cell
Organ
949
epithelium
652
kidney
466
brain
460
connective tissue
375
musculature of body
311
lung
289
intestine
277
pancreas
266
vasculature
255
heart
244
limb
218
bodily fluid
215
embryo
207
blood
204
blood vessel
204
skin of body
174
large intestine
156
liver
146
extraembryonic component
119
stomach
109
eye
89
adipose tissue
89
bone element
87
mammary gland
84
small intestine
83
uterus
78
prostate gland
75
artery
73
adrenal gland
73
placenta
64
penis
64
ureter
62
lymph node
50
gonad
49
thymus
45
esophagus
43
spinal cord
34
spleen
26
testis
25
nerve
24
lymphoid tissue
23
ovary
23
thyroid gland
23
vein
21
lymphatic vessel
19
mouth
18
skeleton
16
bronchus
13
bone marrow
13
breast
13
pituitary gland
10
tongue
10
urinary bladder
10
vagina
5
trachea
4
nose
1
pericardium
Project
760
AMP
4
ENCODE
Genome assembly (visualization)
708
hg19
290
GRCh38
BIOSAMPLE
TYPE
764 results
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target gene predictions
candidate regulatory elements
chromatin state
histone modifications
accessible chromatin
Fine-mapped variants
binding sites
gene expression
eQTL
variant allelic effects
tissue
brain
16
29
18
3
2
1
1
2
1
caudate nucleus
3
5
4
1
2
3
1
2
1
substantia nigra
2
5
3
1
3
1
3
cerebellum
2
3
2
1
1
3
2
2
chorionic villus
4
8
4
+ See 66 more…
cell line
HeLa-S3
55
5
3
1
H1-hESC
39
1
1
1
1
2
8
H9
8
7
1
SK-N-DZ
2
4
2
1
1
SK-N-SH
3
4
2
1
+ See 30 more…
primary cell
trophoblast cell
5
7
4
1
1
choroid plexus epithelial cell
1
2
1
1
1
1
astrocyte of the cerebellum
1
2
1
1
1
astrocyte of the hippocampus
1
2
1
1
1
cardiac fibroblast
3
2
+ See 10 more…
in vitro differentiated cells
endodermal cell
2
4
2
mesodermal cell
1
4
1
1
trophoblast cell
2
2
1
ectodermal cell
1
2
1
cardiac mesoderm primordium
1
1
1
+ See 6 more…
stem cell
H1-hESC
1
undifferentiated ESC (H9 cell line)
1
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