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Schema
Citing CMDGA
Annotation Matrix
Click or enter search terms to filter the experiments included in the matrix.
Annotation type
272
gene expression
accessible chromatin
207
candidate regulatory elements
196
target gene predictions
123
chromatin state
92
differential activity
75
histone modifications
57
binding sites
56
variant allelic effects
36
Fine-mapped variants
32
eQTL
2
caQTL
Date released
320
September, 2022
302
February, 2021
158
September, 2023
51
February, 2024
49
November, 2021
44
March, 2020
38
March, 2023
38
May, 2021
29
May, 2020
27
February, 2020
17
January, 2022
15
August, 2021
13
January, 2020
11
October, 2022
10
January, 2021
9
August, 2017
6
August, 2018
4
May, 2019
3
March, 2024
2
February, 2023
1
July, 2020
1
November, 2019
Available data
594
bed bed3+
391
tsv
114
bed bed9
78
txt
16
bigWig
8
bigBed bed9
7
bigBed narrowPeak
6
csv
Organism
1147
Homo sapiens
Biosample type
675
primary cell
355
tissue
97
cell line
20
in vitro differentiated cells
1
stem cell
Organ
737
epithelium
602
kidney
424
brain
370
connective tissue
348
musculature of body
296
lung
268
intestine
230
vasculature
229
heart
224
limb
212
pancreas
206
bodily fluid
203
embryo
195
blood
191
skin of body
178
blood vessel
164
large intestine
137
extraembryonic component
132
liver
111
stomach
82
adipose tissue
81
small intestine
80
mammary gland
80
uterus
74
bone element
73
prostate gland
69
placenta
66
adrenal gland
64
artery
61
penis
60
ureter
54
lymph node
50
eye
47
thymus
45
gonad
41
esophagus
41
spinal cord
32
spleen
24
testis
22
lymphoid tissue
22
nerve
21
ovary
21
thyroid gland
21
vein
18
mouth
17
lymphatic vessel
13
bronchus
13
pituitary gland
12
breast
11
bone marrow
10
skeleton
10
vagina
9
tongue
9
urinary bladder
4
trachea
3
nose
1
pericardium
Project
932
AMP
155
KPMP
49
ENCODE
10
T1D
2
community
Genome assembly (visualization)
757
hg19
248
GRCh38
annotation_type!
accessible chromatin
BIOSAMPLE
TYPE
1148 results
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Clear Filters
gene expression
candidate regulatory elements
target gene predictions
chromatin state
differential activity
histone modifications
binding sites
variant allelic effects
Fine-mapped variants
eQTL
caQTL
primary cell
hepatocyte
13
1
3
1
4
1
2
endothelial cell
9
7
1
2
2
1
2
epithelial cell of proximal tubule
16
2
1
1
1
1
foreskin keratinocyte
11
4
4
glomerular endothelial cell
14
2
1
1
1
+ See 138 more…
tissue
brain
1
29
16
18
3
1
1
2
caudate nucleus
1
5
3
4
1
1
3
2
substantia nigra
1
5
2
3
1
3
3
layer of hippocampus
6
3
4
1
1
1
cerebellum
2
3
2
2
1
3
2
+ See 66 more…
cell line
EndoC_BH1
8
1
3
1
SK-N-SH
4
3
2
1
pituitary stalk
10
SK-N-DZ
4
2
2
1
SK-N-MC
2
1
1
1
2
+ See 17 more…
in vitro differentiated cells
hepatocyte
2
1
1
hepatocyte(AFP)
3
pancreatic ductal cell
3
foreskin keratinocyte
1
1
mammary gland epithelial cell
1
1
+ See 6 more…
stem cell
undifferentiated ESC (H9 cell line)
1
See all biosamples
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