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Schema
Citing CMDGA
Annotation Matrix
Click or enter search terms to filter the experiments included in the matrix.
Annotation type
287
gene expression
262
accessible chromatin
231
candidate regulatory elements
213
target gene predictions
142
chromatin state
97
differential activity
78
histone modifications
65
variant allelic effects
61
binding sites
45
Fine-mapped variants
38
eQTL
5
caQTL
Date released
364
September, 2022
324
February, 2021
168
September, 2023
127
November, 2021
80
February, 2024
55
March, 2020
49
January, 2020
47
June, 2020
47
May, 2021
40
May, 2020
38
March, 2023
31
February, 2020
24
August, 2021
21
January, 2022
20
January, 2021
16
February, 2023
15
November, 2022
12
October, 2022
9
August, 2017
7
April, 2020
7
October, 2019
6
August, 2018
5
May, 2019
5
November, 2019
4
March, 2024
2
May, 2022
1
July, 2020
Available data
913
bed bed3+
422
tsv
205
bigWig
133
bed bed9
80
txt
14
bigBed bed9
14
bigBed narrowPeak
6
csv
3
bam
3
bed gappedPeak
3
xls
Organism
1523
Homo sapiens
Biosample type
878
primary cell
494
tissue
121
cell line
30
in vitro differentiated cells
1
stem cell
Organ
949
epithelium
652
kidney
466
brain
460
connective tissue
375
musculature of body
311
lung
289
intestine
277
pancreas
266
vasculature
255
heart
244
limb
218
bodily fluid
215
embryo
207
blood
204
blood vessel
204
skin of body
174
large intestine
156
liver
146
extraembryonic component
119
stomach
109
eye
89
adipose tissue
89
bone element
87
mammary gland
84
small intestine
83
uterus
78
prostate gland
75
artery
73
adrenal gland
73
placenta
64
penis
64
ureter
62
lymph node
50
gonad
49
thymus
45
esophagus
43
spinal cord
34
spleen
26
testis
25
nerve
24
lymphoid tissue
23
ovary
23
thyroid gland
23
vein
21
lymphatic vessel
19
mouth
18
skeleton
16
bronchus
13
bone marrow
13
breast
13
pituitary gland
10
tongue
10
urinary bladder
10
vagina
5
trachea
4
nose
1
pericardium
Project
1203
AMP
165
KPMP
127
ENCODE
20
T1D
7
LungMap
2
community
Genome assembly (visualization)
1106
hg19
428
GRCh38
BIOSAMPLE
TYPE
1524 results
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Clear Filters
gene expression
accessible chromatin
candidate regulatory elements
target gene predictions
chromatin state
differential activity
histone modifications
variant allelic effects
binding sites
Fine-mapped variants
eQTL
caQTL
primary cell
endothelial cell
9
15
7
1
2
2
1
2
hepatocyte
13
8
1
3
1
4
2
1
epithelial cell of proximal tubule
16
1
2
1
1
1
1
glomerular endothelial cell
14
2
2
1
1
1
endothelial cell of umbilical vein
2
6
4
5
1
2
+ See 160 more…
tissue
brain
1
2
29
16
18
3
1
1
2
caudate nucleus
1
2
5
3
4
1
1
3
2
coronary artery
1
3
3
3
3
2
3
2
1
pigmented layer of retina
20
tibial artery
1
3
3
2
3
2
3
2
+ See 85 more…
cell line
EndoC_BH1
8
8
1
3
1
SK-N-DZ
1
4
2
2
1
SK-N-SH
4
3
2
1
pituitary stalk
10
SK-N-MC
1
2
1
1
1
2
+ See 20 more…
in vitro differentiated cells
retinal pigment epithelial cell
6
hepatocyte
2
1
1
foreskin keratinocyte
1
1
1
hepatocyte(AFP)
3
mammary gland epithelial cell
1
1
1
+ See 7 more…
stem cell
undifferentiated ESC (H9 cell line)
1
See all biosamples
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