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Schema
Citing CMDGA
Annotation Matrix
Click or enter search terms to filter the experiments included in the matrix.
Annotation type
128
candidate regulatory elements
87
target gene predictions
80
chromatin state
49
histone modifications
47
accessible chromatin
36
Fine-mapped variants
19
binding sites
12
eQTL
10
variant allelic effects
Date released
204
September, 2022
121
February, 2021
39
March, 2020
25
June, 2020
19
January, 2020
12
February, 2020
12
May, 2020
12
May, 2021
7
October, 2022
6
August, 2017
4
May, 2019
3
September, 2023
2
November, 2021
1
January, 2022
1
November, 2019
Available data
346
bed bed3+
74
bed bed9
48
tsv
22
bigWig
6
bigBed bed9
Organism
467
Homo sapiens
Biosample type
342
tissue
84
cell line
38
primary cell
3
in vitro differentiated cells
1
stem cell
Organ
600
epithelium
423
brain
387
connective tissue
387
kidney
367
musculature of body
309
lung
283
intestine
237
limb
229
heart
217
bodily fluid
206
blood
205
embryo
204
vasculature
199
skin of body
186
pancreas
170
large intestine
159
blood vessel
145
extraembryonic component
124
liver
116
stomach
107
eye
87
mammary gland
85
bone element
83
small intestine
80
uterus
76
prostate gland
72
placenta
71
adrenal gland
69
adipose tissue
64
penis
64
ureter
62
lymph node
60
artery
49
thymus
45
gonad
41
spinal cord
40
esophagus
32
spleen
23
lymphoid tissue
23
testis
22
nerve
21
ovary
21
thyroid gland
21
vein
18
skeleton
17
mouth
16
bronchus
16
lymphatic vessel
13
bone marrow
11
breast
11
pituitary gland
9
tongue
9
urinary bladder
8
vagina
5
trachea
4
nose
Project
466
AMP
2
ENCODE
Genome assembly (visualization)
468
hg19
165
GRCh38
BIOSAMPLE
TYPE
468 results
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Clear Filters
candidate regulatory elements
target gene predictions
chromatin state
histone modifications
accessible chromatin
Fine-mapped variants
binding sites
eQTL
variant allelic effects
tissue
brain
29
16
18
3
2
1
1
caudate nucleus
5
3
4
1
2
3
1
ovary
8
6
4
1
testis
7
3
3
1
1
1
layer of hippocampus
6
3
4
1
1
+ See 55 more…
cell line
SK-N-DZ
4
2
2
1
1
SK-N-SH
4
3
2
1
pituitary stalk
10
SK-N-MC
2
1
1
1
1
2
BE(2)-C
1
1
1
1
1
2
+ See 11 more…
primary cell
choroid plexus epithelial cell
2
1
1
1
1
1
astrocyte of the cerebellum
2
1
1
1
1
astrocyte of the hippocampus
2
1
1
1
1
cardiac fibroblast
3
2
brain microvascular endothelial cell
2
1
1
1
+ See 6 more…
in vitro differentiated cells
ESC dervived hypothalamic neuron (arcuate nucleus)
1
ESC dervived hypothalamic progenitor (arcuate nucleus)
1
hippocampal neuron
1
stem cell
undifferentiated ESC (H9 cell line)
1
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