Toggle navigation
Home
About
Project overview
Policies
News
Contact
Data
Experiments
Annotations
Single Cell Embeddings
Statistical Models
Gene Perturbations
Data Standards & QC
Pipelines
Consortia
Publications
Tools
Single Cell Browser
Help
Getting started
Schema
Citing CMDGA
Annotation Matrix
Click or enter search terms to filter the experiments included in the matrix.
Annotation type
198
candidate regulatory elements
136
target gene predictions
131
chromatin state
73
accessible chromatin
55
histone modifications
45
Fine-mapped variants
42
gene expression
38
eQTL
27
variant allelic effects
24
binding sites
2
caQTL
Date released
312
September, 2022
170
February, 2021
54
March, 2020
41
January, 2020
30
June, 2020
30
May, 2020
29
February, 2020
24
January, 2022
16
May, 2021
12
November, 2021
8
August, 2021
7
October, 2022
6
April, 2019
6
August, 2017
6
February, 2024
5
May, 2019
4
November, 2019
3
February, 2023
3
March, 2024
3
September, 2023
2
October, 2019
Available data
519
bed bed3+
120
bed bed9
98
tsv
44
bigWig
16
bigBed bed9
Organism
770
Homo sapiens
Biosample type
602
tissue
93
cell line
70
primary cell
5
in vitro differentiated cells
1
stem cell
Organ
949
epithelium
652
kidney
466
brain
458
connective tissue
375
musculature of body
311
lung
289
intestine
277
pancreas
266
vasculature
255
heart
244
limb
218
bodily fluid
215
embryo
207
blood
204
blood vessel
204
skin of body
174
large intestine
156
liver
146
extraembryonic component
119
stomach
109
eye
89
adipose tissue
89
bone element
87
mammary gland
84
small intestine
83
uterus
78
prostate gland
75
artery
73
adrenal gland
73
placenta
64
penis
64
ureter
62
lymph node
50
gonad
49
thymus
45
esophagus
43
spinal cord
34
spleen
26
testis
25
nerve
24
lymphoid tissue
23
ovary
23
thyroid gland
23
vein
21
lymphatic vessel
19
mouth
18
skeleton
16
bronchus
13
bone marrow
13
breast
13
pituitary gland
10
tongue
10
urinary bladder
10
vagina
5
trachea
4
nose
1
pericardium
Project
759
AMP
12
ENCODE
Genome assembly (visualization)
697
hg19
258
GRCh38
BIOSAMPLE
TYPE
771 results
search-icon
table-tab-icon
Clear Filters
candidate regulatory elements
target gene predictions
chromatin state
accessible chromatin
histone modifications
Fine-mapped variants
gene expression
eQTL
variant allelic effects
binding sites
caQTL
tissue
heart
37
20
21
5
1
3
2
1
brain
29
16
18
2
3
1
2
1
1
heart left ventricle
11
7
8
3
1
1
1
2
caudate nucleus
5
3
4
2
1
3
1
2
1
coronary artery
3
3
3
3
3
1
2
2
1
+ See 72 more…
cell line
SK-N-DZ
4
2
2
1
1
SK-N-SH
4
3
2
1
pituitary stalk
10
SK-N-MC
2
1
1
1
1
2
BE(2)-C
1
1
1
1
1
2
+ See 13 more…
primary cell
fibroblast of cardiac tissue
3
4
3
2
choroid plexus epithelial cell
2
1
1
1
1
1
astrocyte of the cerebellum
2
1
1
1
1
astrocyte of the hippocampus
2
1
1
1
1
cardiac fibroblast
3
2
+ See 16 more…
in vitro differentiated cells
hippocampal neuron
1
1
ESC dervived hypothalamic neuron (arcuate nucleus)
1
ESC dervived hypothalamic progenitor (arcuate nucleus)
1
cardiac fibroblast
1
stem cell
undifferentiated ESC (H9 cell line)
1
See all biosamples
Download