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Schema
Citing CMDGA
Annotation Matrix
Click or enter search terms to filter the experiments included in the matrix.
Annotation type
216
candidate regulatory elements
145
target gene predictions
140
chromatin state
132
accessible chromatin
59
histone modifications
45
Fine-mapped variants
43
gene expression
39
eQTL
30
binding sites
29
variant allelic effects
2
caQTL
Date released
339
September, 2022
187
February, 2021
54
March, 2020
43
January, 2020
36
June, 2020
32
May, 2020
31
February, 2020
27
February, 2023
24
January, 2022
22
November, 2022
16
May, 2021
16
November, 2021
9
October, 2022
8
August, 2021
7
February, 2024
6
April, 2019
6
August, 2017
5
May, 2019
4
November, 2019
3
March, 2024
3
September, 2023
2
October, 2019
Available data
617
bed bed3+
129
bed bed9
100
tsv
80
bigWig
16
bigBed bed9
Organism
879
Homo sapiens
Biosample type
672
tissue
103
cell line
93
primary cell
11
in vitro differentiated cells
1
stem cell
Organ
949
epithelium
652
kidney
466
brain
460
connective tissue
375
musculature of body
311
lung
289
intestine
277
pancreas
266
vasculature
255
heart
244
limb
218
bodily fluid
215
embryo
207
blood
204
blood vessel
204
skin of body
174
large intestine
156
liver
146
extraembryonic component
119
stomach
109
eye
89
adipose tissue
89
bone element
87
mammary gland
84
small intestine
83
uterus
78
prostate gland
75
artery
73
adrenal gland
73
placenta
64
penis
64
ureter
62
lymph node
50
gonad
49
thymus
45
esophagus
43
spinal cord
34
spleen
26
testis
25
nerve
24
lymphoid tissue
23
ovary
23
thyroid gland
23
vein
21
lymphatic vessel
19
mouth
18
skeleton
16
bronchus
13
bone marrow
13
breast
13
pituitary gland
10
tongue
10
urinary bladder
10
vagina
5
trachea
4
nose
1
pericardium
Project
864
AMP
16
ENCODE
Genome assembly (visualization)
804
hg19
274
GRCh38
BIOSAMPLE
TYPE
880 results
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Clear Filters
candidate regulatory elements
target gene predictions
chromatin state
accessible chromatin
histone modifications
Fine-mapped variants
gene expression
eQTL
binding sites
variant allelic effects
caQTL
tissue
heart
37
20
21
5
1
3
1
2
brain
29
16
18
2
3
1
2
1
1
retina
6
3
3
23
1
1
1
1
1
heart left ventricle
11
7
8
3
1
1
1
2
caudate nucleus
5
3
4
2
1
3
1
2
1
+ See 76 more…
cell line
SK-N-DZ
4
2
2
1
1
SK-N-SH
4
3
2
1
pituitary stalk
10
SK-N-MC
2
1
1
1
1
2
WERI-Rb-1
2
1
1
1
1
2
+ See 16 more…
primary cell
fibroblast of cardiac tissue
3
4
3
2
retinal pigment epithelial cell
2
1
1
3
1
2
choroid plexus epithelial cell
2
1
1
1
1
1
astrocyte of the cerebellum
2
1
1
1
1
astrocyte of the hippocampus
2
1
1
1
1
+ See 22 more…
in vitro differentiated cells
retinal pigment epithelial cell
6
hippocampal neuron
1
1
ESC dervived hypothalamic neuron (arcuate nucleus)
1
ESC dervived hypothalamic progenitor (arcuate nucleus)
1
cardiac fibroblast
1
stem cell
undifferentiated ESC (H9 cell line)
1
See all biosamples
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