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Schema
Citing CMDGA
Annotation Matrix
Click or enter search terms to filter the experiments included in the matrix.
Annotation type
219
candidate regulatory elements
140
target gene predictions
123
chromatin state
62
accessible chromatin
62
histone modifications
39
Fine-mapped variants
39
binding sites
37
eQTL
24
gene expression
18
variant allelic effects
Date released
330
September, 2022
199
February, 2021
42
March, 2020
35
June, 2020
30
January, 2020
25
January, 2022
19
February, 2020
19
May, 2020
18
May, 2021
12
November, 2021
12
October, 2022
7
August, 2017
5
March, 2024
4
May, 2019
3
September, 2023
2
February, 2024
1
November, 2019
Available data
540
bed bed3+
116
bed bed9
76
tsv
27
bigWig
6
bigBed bed9
Organism
762
Homo sapiens
Biosample type
449
tissue
157
cell line
143
primary cell
13
in vitro differentiated cells
1
stem cell
Organ
949
epithelium
652
kidney
466
brain
460
connective tissue
375
musculature of body
311
lung
289
intestine
277
pancreas
266
vasculature
255
heart
244
limb
218
bodily fluid
215
embryo
207
blood
204
blood vessel
204
skin of body
174
large intestine
156
liver
146
extraembryonic component
119
stomach
109
eye
89
adipose tissue
89
bone element
87
mammary gland
84
small intestine
83
uterus
78
prostate gland
75
artery
73
adrenal gland
73
placenta
64
penis
64
ureter
62
lymph node
50
gonad
49
thymus
45
esophagus
43
spinal cord
34
spleen
26
testis
25
nerve
24
lymphoid tissue
23
ovary
23
thyroid gland
23
vein
21
lymphatic vessel
19
mouth
18
skeleton
16
bronchus
13
bone marrow
13
breast
13
pituitary gland
10
tongue
10
urinary bladder
10
vagina
5
trachea
4
nose
1
pericardium
Project
751
AMP
12
ENCODE
Genome assembly (visualization)
708
hg19
225
GRCh38
BIOSAMPLE
TYPE
763 results
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Clear Filters
candidate regulatory elements
target gene predictions
chromatin state
accessible chromatin
histone modifications
Fine-mapped variants
binding sites
eQTL
gene expression
variant allelic effects
tissue
brain
29
16
18
2
3
1
2
1
1
spinal cord
14
8
7
1
1
caudate nucleus
5
3
4
2
1
3
2
1
1
ovary
8
6
4
1
1
1
substantia nigra
5
2
3
1
3
3
1
+ See 67 more…
cell line
SK-N-DZ
4
2
2
1
1
SK-N-SH
4
3
2
1
pituitary stalk
10
SK-N-MC
2
1
1
1
1
2
BE(2)-C
1
1
1
1
1
2
+ See 32 more…
primary cell
foreskin keratinocyte
11
4
4
keratinocyte
3
5
3
2
2
1
1
foreskin fibroblast
6
2
1
1
2
4
fibroblast of dermis
4
4
3
1
dermis blood vessel endothelial cell
6
2
2
+ See 21 more…
in vitro differentiated cells
foreskin keratinocyte
1
1
1
iPS DF 4.7 Cell Line
1
1
1
dermis microvascular lymphatic vessel endothelial cell
1
1
hippocampal neuron
1
1
ESC dervived hypothalamic neuron (arcuate nucleus)
1
+ See 2 more…
stem cell
undifferentiated ESC (H9 cell line)
1
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