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Schema
Citing CMDGA
Annotation Matrix
Click or enter search terms to filter the experiments included in the matrix.
Annotation type
242
candidate regulatory elements
151
target gene predictions
143
chromatin state
52
histone modifications
48
accessible chromatin
36
Fine-mapped variants
30
eQTL
25
binding sites
20
gene expression
18
variant allelic effects
Date released
390
September, 2022
180
February, 2021
39
March, 2020
29
January, 2020
27
June, 2020
19
January, 2022
19
May, 2020
18
February, 2020
15
May, 2021
10
October, 2022
7
August, 2017
4
May, 2019
3
September, 2023
2
February, 2024
2
March, 2024
1
November, 2019
Available data
536
bed bed3+
136
bed bed9
68
tsv
21
bigWig
6
bigBed bed9
Organism
764
Homo sapiens
Biosample type
530
tissue
173
cell line
57
primary cell
4
in vitro differentiated cells
1
stem cell
Organ
638
epithelium
509
kidney
466
brain
384
connective tissue
364
musculature of body
299
lung
270
intestine
245
heart
244
limb
237
pancreas
222
vasculature
218
bodily fluid
213
embryo
207
blood
194
skin of body
179
blood vessel
168
large intestine
151
liver
143
extraembryonic component
110
stomach
105
eye
89
adipose tissue
86
bone element
81
mammary gland
81
uterus
80
small intestine
78
prostate gland
71
placenta
70
artery
64
penis
64
ureter
63
adrenal gland
62
lymph node
48
gonad
48
thymus
43
spinal cord
41
esophagus
34
spleen
26
testis
25
nerve
24
lymphoid tissue
23
vein
21
ovary
21
thyroid gland
19
mouth
18
skeleton
13
breast
13
bronchus
13
pituitary gland
12
lymphatic vessel
10
bone marrow
10
tongue
10
urinary bladder
10
vagina
5
trachea
4
nose
1
pericardium
Project
765
AMP
9
ENCODE
3
LungMap
Genome assembly (visualization)
720
hg19
223
GRCh38
BIOSAMPLE
TYPE
765 results
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Clear Filters
candidate regulatory elements
target gene predictions
chromatin state
histone modifications
accessible chromatin
Fine-mapped variants
eQTL
binding sites
gene expression
variant allelic effects
tissue
brain
29
16
18
3
2
2
1
1
1
lung
33
17
16
1
1
left lung
26
13
13
right lung
22
11
11
1
caudate nucleus
5
3
4
1
2
3
2
1
1
+ See 60 more…
cell line
A549
21
19
18
1
1
2
SK-N-DZ
4
2
2
1
1
SK-N-SH
4
3
2
1
pituitary stalk
10
IMR-90
2
2
1
1
1
2
+ See 17 more…
primary cell
fibroblast of lung
6
4
4
2
choroid plexus epithelial cell
2
1
1
1
1
1
astrocyte of the cerebellum
2
1
1
1
1
astrocyte of the hippocampus
2
1
1
1
1
cardiac fibroblast
3
2
+ See 7 more…
in vitro differentiated cells
hippocampal neuron
1
1
ESC dervived hypothalamic neuron (arcuate nucleus)
1
ESC dervived hypothalamic progenitor (arcuate nucleus)
1
stem cell
undifferentiated ESC (H9 cell line)
1
See all biosamples
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