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Schema
Citing CMDGA
Annotation Matrix
Click or enter search terms to filter the experiments included in the matrix.
Annotation type
270
candidate regulatory elements
162
target gene predictions
153
chromatin state
57
histone modifications
51
accessible chromatin
36
Fine-mapped variants
32
binding sites
30
eQTL
20
gene expression
18
variant allelic effects
Date released
420
September, 2022
208
February, 2021
39
March, 2020
30
June, 2020
29
January, 2020
19
January, 2022
19
May, 2020
18
February, 2020
16
May, 2021
12
October, 2022
7
August, 2017
4
May, 2019
3
September, 2023
2
February, 2024
2
March, 2024
1
November, 2019
Available data
590
bed bed3+
146
bed bed9
68
tsv
21
bigWig
6
bigBed bed9
Organism
828
Homo sapiens
Biosample type
532
tissue
188
cell line
98
primary cell
10
in vitro differentiated cells
1
stem cell
Organ
638
epithelium
509
kidney
466
brain
384
connective tissue
364
musculature of body
299
lung
270
intestine
245
heart
244
limb
237
pancreas
222
vasculature
218
bodily fluid
213
embryo
207
blood
194
skin of body
179
blood vessel
168
large intestine
151
liver
143
extraembryonic component
110
stomach
105
eye
89
adipose tissue
86
bone element
81
mammary gland
81
uterus
80
small intestine
78
prostate gland
71
placenta
70
artery
64
penis
64
ureter
63
adrenal gland
62
lymph node
48
gonad
48
thymus
43
spinal cord
41
esophagus
34
spleen
26
testis
25
nerve
24
lymphoid tissue
23
vein
21
ovary
21
thyroid gland
19
mouth
18
skeleton
13
breast
13
bronchus
13
pituitary gland
12
lymphatic vessel
10
bone marrow
10
tongue
10
urinary bladder
10
vagina
5
trachea
4
nose
1
pericardium
Project
829
AMP
9
ENCODE
3
LungMap
Genome assembly (visualization)
784
hg19
233
GRCh38
BIOSAMPLE
TYPE
829 results
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Clear Filters
candidate regulatory elements
target gene predictions
chromatin state
histone modifications
accessible chromatin
Fine-mapped variants
binding sites
eQTL
gene expression
variant allelic effects
tissue
brain
29
16
18
3
2
1
2
1
1
lung
33
17
16
1
1
left lung
26
13
13
right lung
22
11
11
1
caudate nucleus
5
3
4
1
2
3
2
1
1
+ See 61 more…
cell line
A549
21
19
18
1
1
2
SK-N-DZ
4
2
2
1
1
SK-N-SH
4
3
2
1
pituitary stalk
10
IMR-90
2
2
1
1
1
2
+ See 21 more…
primary cell
foreskin keratinocyte
11
4
4
fibroblast of lung
6
4
4
2
foreskin fibroblast
6
2
1
2
1
4
choroid plexus epithelial cell
2
1
1
1
1
1
astrocyte of the cerebellum
2
1
1
1
1
+ See 10 more…
in vitro differentiated cells
foreskin keratinocyte
1
1
1
foreskin melanocyte
1
1
1
hippocampal neuron
1
1
ESC dervived hypothalamic neuron (arcuate nucleus)
1
ESC dervived hypothalamic progenitor (arcuate nucleus)
1
stem cell
undifferentiated ESC (H9 cell line)
1
See all biosamples
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