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Schema
Citing CMDGA
Annotation Matrix
Click or enter search terms to filter the experiments included in the matrix.
Annotation type
335
candidate regulatory elements
273
gene expression
270
target gene predictions
258
accessible chromatin
193
chromatin state
92
differential activity
79
histone modifications
66
binding sites
56
variant allelic effects
36
Fine-mapped variants
33
eQTL
2
caQTL
Date released
532
September, 2022
370
February, 2021
158
September, 2023
127
November, 2021
77
February, 2024
51
June, 2020
49
May, 2021
45
March, 2020
41
January, 2020
38
March, 2023
32
May, 2020
27
February, 2020
23
August, 2021
20
January, 2021
19
January, 2022
15
November, 2022
15
October, 2022
12
February, 2023
10
August, 2017
8
April, 2020
6
August, 2018
5
October, 2019
4
March, 2024
4
May, 2019
2
May, 2022
2
November, 2019
1
July, 2020
Available data
1065
bed bed3+
392
tsv
196
bigWig
183
bed bed9
78
txt
14
bigBed narrowPeak
8
bigBed bed9
6
csv
3
bam
3
bed gappedPeak
3
xls
Organism
1692
Homo sapiens
Biosample type
858
primary cell
591
tissue
213
cell line
30
in vitro differentiated cells
1
stem cell
Organ
949
epithelium
652
kidney
466
brain
458
connective tissue
375
musculature of body
311
lung
289
intestine
277
pancreas
266
vasculature
255
heart
244
limb
218
bodily fluid
215
embryo
207
blood
204
blood vessel
204
skin of body
174
large intestine
156
liver
146
extraembryonic component
119
stomach
109
eye
89
adipose tissue
89
bone element
87
mammary gland
84
small intestine
83
uterus
78
prostate gland
75
artery
73
adrenal gland
73
placenta
64
penis
64
ureter
62
lymph node
50
gonad
49
thymus
45
esophagus
43
spinal cord
34
spleen
26
testis
25
nerve
24
lymphoid tissue
23
ovary
23
thyroid gland
23
vein
21
lymphatic vessel
19
mouth
18
skeleton
16
bronchus
13
bone marrow
13
breast
13
pituitary gland
10
tongue
10
urinary bladder
10
vagina
5
trachea
4
nose
1
pericardium
Project
1381
AMP
155
KPMP
127
ENCODE
20
T1D
8
LungMap
2
community
Genome assembly (visualization)
1299
hg19
452
GRCh38
BIOSAMPLE
TYPE
1693 results
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Clear Filters
candidate regulatory elements
gene expression
target gene predictions
accessible chromatin
chromatin state
differential activity
histone modifications
binding sites
variant allelic effects
Fine-mapped variants
eQTL
caQTL
primary cell
endothelial cell
9
7
15
1
2
2
1
2
hepatocyte
1
13
3
8
1
4
1
2
epithelial cell of proximal tubule
2
16
1
1
1
1
1
glomerular endothelial cell
2
14
1
2
1
1
endothelial cell of umbilical vein
6
4
2
5
2
1
+ See 154 more…
tissue
brain
29
1
16
2
18
3
1
1
2
lung
33
1
17
16
1
left lung
26
13
13
right lung
22
11
1
11
caudate nucleus
5
1
3
2
4
1
1
3
2
+ See 80 more…
cell line
A549
21
19
1
18
1
2
EndoC_BH1
8
1
8
3
1
SK-N-DZ
4
2
1
2
1
SK-N-SH
4
3
2
1
pituitary stalk
10
+ See 27 more…
in vitro differentiated cells
retinal pigment epithelial cell
6
hepatocyte
2
1
1
foreskin keratinocyte
1
1
1
hepatocyte(AFP)
3
mammary gland epithelial cell
1
1
1
+ See 7 more…
stem cell
undifferentiated ESC (H9 cell line)
1
See all biosamples
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