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Schema
Citing CMDGA
Annotation Matrix
Click or enter search terms to filter the experiments included in the matrix.
Annotation type
311
candidate regulatory elements
198
target gene predictions
179
chromatin state
67
accessible chromatin
57
histone modifications
36
Fine-mapped variants
32
eQTL
31
binding sites
22
gene expression
18
variant allelic effects
Date released
488
September, 2022
226
February, 2021
40
March, 2020
34
June, 2020
29
January, 2020
21
January, 2022
20
May, 2021
19
May, 2020
18
February, 2020
15
November, 2021
11
October, 2022
10
August, 2017
5
February, 2024
4
March, 2024
4
May, 2019
3
April, 2020
3
September, 2023
1
November, 2019
Available data
685
bed bed3+
169
bed bed9
70
tsv
33
bigWig
6
bigBed bed9
Organism
950
Homo sapiens
Biosample type
664
tissue
207
cell line
75
primary cell
4
in vitro differentiated cells
1
stem cell
Organ
949
epithelium
652
kidney
466
brain
460
connective tissue
375
musculature of body
311
lung
289
intestine
277
pancreas
266
vasculature
255
heart
244
limb
218
bodily fluid
215
embryo
207
blood
204
blood vessel
204
skin of body
174
large intestine
156
liver
146
extraembryonic component
119
stomach
109
eye
89
adipose tissue
89
bone element
87
mammary gland
84
small intestine
83
uterus
78
prostate gland
75
artery
73
adrenal gland
73
placenta
64
penis
64
ureter
62
lymph node
50
gonad
49
thymus
45
esophagus
43
spinal cord
34
spleen
26
testis
25
nerve
24
lymphoid tissue
23
ovary
23
thyroid gland
23
vein
21
lymphatic vessel
19
mouth
18
skeleton
16
bronchus
13
bone marrow
13
breast
13
pituitary gland
10
tongue
10
urinary bladder
10
vagina
5
trachea
4
nose
1
pericardium
Project
933
AMP
15
ENCODE
3
LungMap
Genome assembly (visualization)
902
hg19
275
GRCh38
BIOSAMPLE
TYPE
951 results
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Clear Filters
candidate regulatory elements
target gene predictions
chromatin state
accessible chromatin
histone modifications
Fine-mapped variants
eQTL
binding sites
gene expression
variant allelic effects
tissue
brain
29
16
18
2
3
2
1
1
1
lung
33
17
16
1
1
large intestine
27
14
13
1
1
left lung
26
13
13
right lung
22
11
11
1
+ See 72 more…
cell line
A549
21
19
18
1
1
2
SK-N-DZ
4
2
2
1
1
SK-N-SH
4
3
2
1
pituitary stalk
10
IMR-90
2
2
1
1
1
2
+ See 25 more…
primary cell
fibroblast of lung
6
4
4
2
choroid plexus epithelial cell
2
1
1
1
1
1
type II pneumocyte
2
4
1
astrocyte of the cerebellum
2
1
1
1
1
astrocyte of the hippocampus
2
1
1
1
1
+ See 11 more…
in vitro differentiated cells
hippocampal neuron
1
1
ESC dervived hypothalamic neuron (arcuate nucleus)
1
ESC dervived hypothalamic progenitor (arcuate nucleus)
1
stem cell
undifferentiated ESC (H9 cell line)
1
See all biosamples
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