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Schema
Citing CMDGA
Annotation Matrix
Click or enter search terms to filter the experiments included in the matrix.
Annotation type
388
candidate regulatory elements
234
target gene predictions
217
chromatin state
84
accessible chromatin
59
histone modifications
42
Fine-mapped variants
37
eQTL
32
binding sites
31
gene expression
25
variant allelic effects
2
caQTL
1
differential activity
Date released
594
September, 2022
272
February, 2021
48
March, 2020
34
January, 2020
33
June, 2020
24
February, 2020
24
May, 2020
21
May, 2021
20
January, 2022
20
November, 2021
17
February, 2024
13
October, 2022
10
August, 2017
6
May, 2019
4
March, 2024
3
April, 2020
3
May, 2022
3
September, 2023
1
August, 2021
1
November, 2019
1
October, 2019
Available data
829
bed bed3+
207
bed bed9
82
tsv
46
bigWig
9
bigBed bed9
Organism
1151
Homo sapiens
Biosample type
836
tissue
190
cell line
119
primary cell
6
in vitro differentiated cells
1
stem cell
Organ
949
epithelium
652
kidney
466
brain
458
connective tissue
375
musculature of body
311
lung
289
intestine
277
pancreas
266
vasculature
255
heart
244
limb
218
bodily fluid
215
embryo
207
blood
204
blood vessel
204
skin of body
174
large intestine
156
liver
146
extraembryonic component
119
stomach
109
eye
89
adipose tissue
89
bone element
87
mammary gland
84
small intestine
83
uterus
78
prostate gland
75
artery
73
adrenal gland
73
placenta
64
penis
64
ureter
62
lymph node
50
gonad
49
thymus
45
esophagus
43
spinal cord
34
spleen
26
testis
25
nerve
24
lymphoid tissue
23
ovary
23
thyroid gland
23
vein
21
lymphatic vessel
19
mouth
18
skeleton
16
bronchus
13
bone marrow
13
breast
13
pituitary gland
10
tongue
10
urinary bladder
10
vagina
5
trachea
4
nose
1
pericardium
Project
1129
AMP
20
ENCODE
3
LungMap
Genome assembly (visualization)
1099
hg19
328
GRCh38
BIOSAMPLE
TYPE
1152 results
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Clear Filters
candidate regulatory elements
target gene predictions
chromatin state
accessible chromatin
histone modifications
Fine-mapped variants
eQTL
binding sites
gene expression
variant allelic effects
caQTL
differential activity
tissue
brain
29
16
18
2
3
2
1
1
1
lung
33
17
16
1
1
muscle of arm
33
16
16
1
1
muscle of leg
27
14
15
2
muscle of back
28
13
13
+ See 83 more…
cell line
A549
21
19
18
1
1
2
SK-N-DZ
4
2
2
1
1
SK-N-SH
4
3
2
1
pituitary stalk
10
IMR-90
2
2
1
1
1
2
+ See 20 more…
primary cell
fibroblast of lung
6
4
4
2
skeletal muscle satellite cell
2
2
2
5
2
skeletal muscle fiber
5
2
2
choroid plexus epithelial cell
2
1
1
1
1
1
type I muscle cell
1
3
1
1
1
+ See 19 more…
in vitro differentiated cells
hippocampal neuron
1
1
myotube
1
1
ESC dervived hypothalamic neuron (arcuate nucleus)
1
ESC dervived hypothalamic progenitor (arcuate nucleus)
1
stem cell
undifferentiated ESC (H9 cell line)
1
See all biosamples
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