Toggle navigation
Home
About
Project overview
Policies
News
Contact
Data
Experiments
Annotations
Single Cell Embeddings
Statistical Models
Gene Perturbations
Data Standards & QC
Pipelines
Consortia
Publications
Tools
Single Cell Browser
Help
Getting started
Schema
Citing CMDGA
Annotation Matrix
Click or enter search terms to filter the experiments included in the matrix.
Annotation type
259
candidate regulatory elements
218
target gene predictions
151
chromatin state
62
accessible chromatin
54
histone modifications
36
Fine-mapped variants
32
eQTL
29
binding sites
23
gene expression
19
variant allelic effects
Date released
414
September, 2022
194
February, 2021
54
February, 2024
39
March, 2020
30
June, 2020
29
January, 2020
21
January, 2022
19
May, 2020
18
February, 2020
18
May, 2021
13
November, 2021
11
October, 2022
7
August, 2017
5
March, 2024
4
May, 2019
3
April, 2020
3
September, 2023
1
November, 2019
Available data
641
bed bed3+
144
bed bed9
71
tsv
32
bigWig
6
bigBed bed9
Organism
882
Homo sapiens
Biosample type
563
tissue
238
cell line
77
primary cell
4
in vitro differentiated cells
1
stem cell
Organ
949
epithelium
652
kidney
466
brain
460
connective tissue
375
musculature of body
311
lung
289
intestine
277
pancreas
266
vasculature
255
heart
244
limb
218
bodily fluid
215
embryo
207
blood
204
blood vessel
204
skin of body
174
large intestine
156
liver
146
extraembryonic component
119
stomach
109
eye
89
adipose tissue
89
bone element
87
mammary gland
84
small intestine
83
uterus
78
prostate gland
75
artery
73
adrenal gland
73
placenta
64
penis
64
ureter
62
lymph node
50
gonad
49
thymus
45
esophagus
43
spinal cord
34
spleen
26
testis
25
nerve
24
lymphoid tissue
23
ovary
23
thyroid gland
23
vein
21
lymphatic vessel
19
mouth
18
skeleton
16
bronchus
13
bone marrow
13
breast
13
pituitary gland
10
tongue
10
urinary bladder
10
vagina
5
trachea
4
nose
1
pericardium
Project
867
AMP
13
ENCODE
3
LungMap
Genome assembly (visualization)
833
hg19
297
GRCh38
BIOSAMPLE
TYPE
883 results
search-icon
table-tab-icon
Clear Filters
candidate regulatory elements
target gene predictions
chromatin state
accessible chromatin
histone modifications
Fine-mapped variants
eQTL
binding sites
gene expression
variant allelic effects
tissue
brain
29
16
18
2
3
2
1
1
1
lung
33
17
16
1
1
left lung
26
13
13
right lung
22
11
11
1
caudate nucleus
5
3
4
2
1
3
2
1
1
+ See 66 more…
cell line
HeLa-S3
5
55
3
1
A549
21
19
18
1
1
2
SK-N-DZ
4
2
2
1
1
SK-N-SH
4
3
2
1
pituitary stalk
10
+ See 19 more…
primary cell
fibroblast of lung
6
4
4
2
choroid plexus epithelial cell
2
1
1
1
1
1
type II pneumocyte
2
4
1
astrocyte of the cerebellum
2
1
1
1
1
astrocyte of the hippocampus
2
1
1
1
1
+ See 13 more…
in vitro differentiated cells
hippocampal neuron
1
1
ESC dervived hypothalamic neuron (arcuate nucleus)
1
ESC dervived hypothalamic progenitor (arcuate nucleus)
1
stem cell
undifferentiated ESC (H9 cell line)
1
See all biosamples
Download