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Schema
Citing CMDGA
Annotation Matrix
Click or enter search terms to filter the experiments included in the matrix.
Annotation type
242
candidate regulatory elements
154
target gene predictions
143
chromatin state
57
accessible chromatin
52
histone modifications
36
Fine-mapped variants
29
eQTL
25
binding sites
20
gene expression
18
variant allelic effects
Date released
390
September, 2022
180
February, 2021
39
March, 2020
29
January, 2020
27
June, 2020
19
January, 2022
19
May, 2020
17
February, 2020
15
May, 2021
10
October, 2022
9
November, 2021
7
August, 2017
4
May, 2019
3
April, 2020
3
September, 2023
2
February, 2024
2
March, 2024
1
November, 2019
Available data
548
bed bed3+
136
bed bed9
67
tsv
30
bigWig
6
bigBed bed9
Organism
776
Homo sapiens
Biosample type
529
tissue
173
cell line
69
primary cell
4
in vitro differentiated cells
1
stem cell
Organ
949
epithelium
652
kidney
465
brain
460
connective tissue
375
musculature of body
311
lung
289
intestine
277
pancreas
266
vasculature
255
heart
244
limb
218
bodily fluid
215
embryo
207
blood
204
blood vessel
204
skin of body
174
large intestine
156
liver
146
extraembryonic component
119
stomach
109
eye
89
adipose tissue
89
bone element
87
mammary gland
84
small intestine
83
uterus
78
prostate gland
75
artery
73
adrenal gland
73
placenta
64
penis
64
ureter
62
lymph node
50
gonad
49
thymus
45
esophagus
43
spinal cord
34
spleen
26
testis
25
nerve
24
lymphoid tissue
23
ovary
23
thyroid gland
23
vein
21
lymphatic vessel
19
mouth
18
skeleton
16
bronchus
13
bone marrow
13
breast
13
pituitary gland
10
tongue
10
urinary bladder
10
vagina
5
trachea
4
nose
1
pericardium
Project
764
AMP
9
ENCODE
3
LungMap
Genome assembly (visualization)
731
hg19
231
GRCh38
BIOSAMPLE
TYPE
776 results
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Clear Filters
candidate regulatory elements
target gene predictions
chromatin state
accessible chromatin
histone modifications
Fine-mapped variants
eQTL
binding sites
gene expression
variant allelic effects
tissue
brain
29
16
18
2
3
2
1
1
1
lung
33
17
16
1
1
left lung
26
13
13
right lung
22
11
11
1
caudate nucleus
5
3
4
2
1
3
1
1
1
+ See 60 more…
cell line
A549
21
19
18
1
1
2
SK-N-DZ
4
2
2
1
1
SK-N-SH
4
3
2
1
pituitary stalk
10
IMR-90
2
2
1
1
1
2
+ See 17 more…
primary cell
fibroblast of lung
6
4
4
2
choroid plexus epithelial cell
2
1
1
1
1
1
type II pneumocyte
2
4
1
astrocyte of the cerebellum
2
1
1
1
1
astrocyte of the hippocampus
2
1
1
1
1
+ See 10 more…
in vitro differentiated cells
hippocampal neuron
1
1
ESC dervived hypothalamic neuron (arcuate nucleus)
1
ESC dervived hypothalamic progenitor (arcuate nucleus)
1
stem cell
undifferentiated ESC (H9 cell line)
1
See all biosamples
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