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Schema
Citing CMDGA
Annotation Matrix
Click or enter search terms to filter the experiments included in the matrix.
Annotation type
315
candidate regulatory elements
241
target gene predictions
175
chromatin state
82
accessible chromatin
66
histone modifications
42
Fine-mapped variants
40
gene expression
36
binding sites
36
eQTL
24
variant allelic effects
2
caQTL
1
differential activity
Date released
468
September, 2022
255
February, 2021
67
February, 2024
48
March, 2020
38
June, 2020
34
January, 2020
24
February, 2020
24
May, 2020
24
May, 2021
19
January, 2022
13
November, 2021
10
August, 2017
10
October, 2022
9
August, 2021
6
May, 2019
3
March, 2024
3
May, 2022
3
September, 2023
1
November, 2019
1
October, 2019
Available data
771
bed bed3+
165
bed bed9
91
tsv
39
bigWig
9
bigBed bed9
Organism
1059
Homo sapiens
Biosample type
690
tissue
221
cell line
107
primary cell
40
in vitro differentiated cells
2
stem cell
Organ
949
epithelium
652
kidney
466
brain
460
connective tissue
375
musculature of body
311
lung
289
intestine
277
pancreas
266
vasculature
255
heart
244
limb
218
bodily fluid
215
embryo
207
blood
204
blood vessel
204
skin of body
174
large intestine
156
liver
146
extraembryonic component
119
stomach
109
eye
89
adipose tissue
89
bone element
87
mammary gland
84
small intestine
83
uterus
78
prostate gland
75
artery
73
adrenal gland
73
placenta
64
penis
64
ureter
62
lymph node
50
gonad
49
thymus
45
esophagus
43
spinal cord
34
spleen
26
testis
25
nerve
24
lymphoid tissue
23
ovary
23
thyroid gland
23
vein
21
lymphatic vessel
19
mouth
18
skeleton
16
bronchus
13
bone marrow
13
breast
13
pituitary gland
10
tongue
10
urinary bladder
10
vagina
5
trachea
4
nose
1
pericardium
Project
1047
AMP
13
ENCODE
Genome assembly (visualization)
999
hg19
329
GRCh38
BIOSAMPLE
TYPE
1060 results
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Clear Filters
candidate regulatory elements
target gene predictions
chromatin state
accessible chromatin
histone modifications
Fine-mapped variants
gene expression
binding sites
eQTL
variant allelic effects
caQTL
differential activity
tissue
brain
29
16
18
2
3
1
1
2
1
muscle of arm
33
16
16
1
1
muscle of leg
27
14
15
2
muscle of back
28
13
13
caudate nucleus
5
3
4
2
1
3
1
2
1
+ See 85 more…
cell line
H1-hESC
1
39
1
1
1
8
2
H9
7
8
1
SK-N-DZ
4
2
2
1
1
SK-N-SH
4
3
2
1
pituitary stalk
10
+ See 31 more…
primary cell
trophoblast cell
7
5
4
1
1
skeletal muscle satellite cell
2
2
2
5
2
skeletal muscle fiber
5
2
2
choroid plexus epithelial cell
2
1
1
1
1
1
type I muscle cell
1
3
1
1
1
+ See 17 more…
in vitro differentiated cells
endodermal cell
4
2
2
mesodermal cell
4
1
1
1
trophoblast cell
2
2
1
ectodermal cell
2
1
1
olfactory neurosphere cell line
1
1
1
1
+ See 8 more…
stem cell
H1-hESC
1
undifferentiated ESC (H9 cell line)
1
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