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Schema
Citing CMDGA
Annotation Matrix
Click or enter search terms to filter the experiments included in the matrix.
Annotation type
135
candidate regulatory elements
120
target gene predictions
107
accessible chromatin
67
gene expression
54
histone modifications
44
eQTL
41
Fine-mapped variants
33
differential activity
28
variant allelic effects
21
binding sites
10
chromatin state
2
sQTL
2
variant to gene
Date released
151
September, 2022
141
February, 2021
47
March, 2020
47
March, 2023
44
May, 2021
32
January, 2020
26
February, 2024
25
June, 2020
25
May, 2020
22
January, 2022
20
February, 2020
20
January, 2021
18
November, 2021
9
August, 2017
8
August, 2021
7
August, 2018
6
October, 2019
6
October, 2022
3
September, 2023
2
November, 2019
1
April, 2019
1
February, 2023
1
January, 2018
1
June, 2021
1
March, 2024
Available data
468
bed bed3+
143
tsv
bed bed9
78
bigWig
14
bigBed narrowPeak
8
bigBed bed9
3
bam
3
bed gappedPeak
3
csv
3
xls
Organism
663
Homo sapiens
Biosample type
402
tissue
157
primary cell
97
cell line
7
in vitro differentiated cells
1
stem cell
Organ
899
epithelium
575
kidney
417
connective tissue
400
brain
304
musculature of body
264
pancreas
241
lung
234
intestine
234
vasculature
209
heart
194
limb
193
bodily fluid
188
embryo
184
blood
177
blood vessel
170
skin of body
142
liver
141
large intestine
113
extraembryonic component
100
eye
96
stomach
81
adipose tissue
79
uterus
75
bone element
73
mammary gland
67
artery
65
prostate gland
65
small intestine
59
adrenal gland
57
placenta
54
lymph node
54
penis
51
ureter
42
gonad
38
esophagus
38
thymus
35
spinal cord
28
spleen
22
testis
21
nerve
19
lymphatic vessel
19
lymphoid tissue
19
ovary
19
thyroid gland
19
vein
15
mouth
15
skeleton
14
bronchus
13
pituitary gland
12
bone marrow
11
breast
8
tongue
8
urinary bladder
8
vagina
5
trachea
3
nose
1
pericardium
Project
624
AMP
20
T1D
18
ENCODE
2
community
Genome assembly (visualization)
530
hg19
134
GRCh38
files.file_type!
bed bed9
BIOSAMPLE
TYPE
664 results
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Clear Filters
candidate regulatory elements
target gene predictions
accessible chromatin
gene expression
histone modifications
eQTL
Fine-mapped variants
differential activity
variant allelic effects
binding sites
chromatin state
sQTL
variant to gene
tissue
brain
29
16
2
1
3
2
1
1
islet of Langerhans
1
6
11
1
13
2
1
2
3
2
2
body of pancreas
8
5
2
1
3
1
pancreas
5
5
5
1
1
1
1
1
caudate nucleus
5
3
2
1
1
2
3
1
1
+ See 67 more…
primary cell
pancreatic ductal cell
3
6
3
2
3
1
1
pancreatic beta cell
3
8
3
3
1
pancreatic alpha cell
3
7
3
3
1
pancreatic acinar cell
3
6
3
3
1
pancreatic delta cell
4
5
3
3
1
+ See 21 more…
cell line
EndoC_BH1
1
8
8
3
1
pituitary stalk
10
SK-N-DZ
4
2
1
1
SK-N-SH
4
3
1
SK-N-MC
2
1
1
1
2
+ See 15 more…
in vitro differentiated cells
pancreatic ductal cell
3
hippocampal neuron
1
1
ESC dervived hypothalamic neuron (arcuate nucleus)
1
ESC dervived hypothalamic progenitor (arcuate nucleus)
1
stem cell
undifferentiated ESC (H9 cell line)
1
See all biosamples
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