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Schema
Citing CMDGA
Annotation Matrix
Click or enter search terms to filter the experiments included in the matrix.
Annotation type
164
candidate regulatory elements
137
target gene predictions
111
accessible chromatin
105
chromatin state
67
gene expression
57
histone modifications
45
eQTL
41
Fine-mapped variants
33
differential activity
28
variant allelic effects
24
binding sites
2
sQTL
2
variant to gene
Date released
272
September, 2022
159
February, 2021
47
March, 2020
47
March, 2023
45
May, 2021
33
January, 2020
27
June, 2020
26
February, 2024
25
May, 2020
23
January, 2022
20
February, 2020
20
January, 2021
20
November, 2021
9
August, 2017
8
August, 2021
7
August, 2018
7
October, 2022
6
October, 2019
4
May, 2019
3
November, 2019
3
September, 2023
1
April, 2019
1
February, 2023
1
January, 2018
1
June, 2021
1
March, 2024
Available data
524
bed bed3+
143
tsv
95
bed bed9
80
bigWig
14
bigBed narrowPeak
8
bigBed bed9
3
bam
3
bed gappedPeak
3
csv
3
xls
Organism
815
Homo sapiens
Biosample type
523
tissue
171
primary cell
114
cell line
7
in vitro differentiated cells
1
stem cell
Organ
949
epithelium
652
kidney
466
brain
458
connective tissue
375
musculature of body
311
lung
289
intestine
277
pancreas
266
vasculature
255
heart
244
limb
218
bodily fluid
215
embryo
207
blood
204
blood vessel
204
skin of body
174
large intestine
156
liver
146
extraembryonic component
119
stomach
109
eye
89
adipose tissue
89
bone element
87
mammary gland
84
small intestine
83
uterus
78
prostate gland
75
artery
73
adrenal gland
73
placenta
64
penis
64
ureter
62
lymph node
50
gonad
49
thymus
45
esophagus
43
spinal cord
34
spleen
26
testis
25
nerve
24
lymphoid tissue
23
ovary
23
thyroid gland
23
vein
21
lymphatic vessel
19
mouth
18
skeleton
16
bronchus
13
bone marrow
13
breast
13
pituitary gland
10
tongue
10
urinary bladder
10
vagina
5
trachea
4
nose
1
pericardium
Project
774
AMP
20
ENCODE
20
T1D
2
community
Genome assembly (visualization)
681
hg19
232
GRCh38
BIOSAMPLE
TYPE
816 results
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Clear Filters
candidate regulatory elements
target gene predictions
accessible chromatin
chromatin state
gene expression
histone modifications
eQTL
Fine-mapped variants
differential activity
variant allelic effects
binding sites
sQTL
variant to gene
tissue
brain
29
16
2
18
1
3
2
1
1
placenta
26
15
1
14
2
1
1
islet of Langerhans
1
6
3
11
1
13
2
1
2
2
2
body of pancreas
8
5
4
2
1
3
1
caudate nucleus
5
3
2
4
1
1
2
3
1
+ See 68 more…
primary cell
pancreatic ductal cell
3
6
3
2
3
1
1
pancreatic beta cell
3
8
3
3
1
pancreatic alpha cell
3
7
3
3
1
pancreatic acinar cell
3
6
3
3
1
pancreatic delta cell
4
5
3
3
1
+ See 24 more…
cell line
EndoC_BH1
1
8
8
3
1
SK-N-DZ
4
2
1
2
1
SK-N-SH
4
3
2
1
pituitary stalk
10
SK-N-MC
2
1
1
1
1
2
+ See 16 more…
in vitro differentiated cells
pancreatic ductal cell
3
hippocampal neuron
1
1
ESC dervived hypothalamic neuron (arcuate nucleus)
1
ESC dervived hypothalamic progenitor (arcuate nucleus)
1
stem cell
undifferentiated ESC (H9 cell line)
1
See all biosamples
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