Toggle navigation
Home
About
Project overview
Policies
News
Contact
Data
Experiments
Annotations
Single Cell Embeddings
Statistical Models
Gene Perturbations
Data Standards & QC
Pipelines
Consortia
Publications
Tools
Single Cell Browser
Help
Getting started
Schema
Citing CMDGA
Annotation Matrix
Click or enter search terms to filter the experiments included in the matrix.
Annotation type
140
candidate regulatory elements
93
target gene predictions
51
histone modifications
46
accessible chromatin
19
binding sites
10
variant allelic effects
6
chromatin state
Date released
152
September, 2022
127
February, 2021
23
June, 2020
18
January, 2020
12
May, 2020
12
May, 2021
7
October, 2022
6
August, 2017
3
September, 2023
2
March, 2020
2
November, 2021
1
January, 2022
Available data
365
bed bed3+
82
bed bed9
67
tsv
23
bigWig
6
bigBed bed9
Organism
365
Homo sapiens
Biosample type
253
tissue
68
cell line
40
primary cell
3
in vitro differentiated cells
1
stem cell
Organ
547
epithelium
330
connective tissue
309
brain
309
kidney
281
musculature of body
239
lung
228
intestine
190
bodily fluid
181
blood
178
embryo
175
limb
173
heart
165
skin of body
163
vasculature
159
pancreas
137
large intestine
123
blood vessel
112
extraembryonic component
101
liver
98
eye
93
stomach
76
uterus
73
mammary gland
70
bone element
64
small intestine
63
prostate gland
57
adrenal gland
56
placenta
54
lymph node
54
penis
51
ureter
49
adipose tissue
46
artery
38
thymus
37
gonad
33
esophagus
29
spinal cord
26
spleen
19
testis
18
lymphoid tissue
17
ovary
17
thyroid gland
17
vein
15
skeleton
14
bronchus
14
lymphatic vessel
14
nerve
13
mouth
11
bone marrow
11
pituitary gland
9
breast
7
tongue
7
urinary bladder
6
vagina
5
trachea
3
nose
Project
363
AMP
2
ENCODE
Genome assembly (visualization)
365
hg19
23
GRCh38
BIOSAMPLE
TYPE
365 results
search-icon
table-tab-icon
Clear Filters
candidate regulatory elements
target gene predictions
histone modifications
accessible chromatin
binding sites
variant allelic effects
chromatin state
tissue
brain
29
16
3
2
1
1
placenta
26
15
2
1
1
caudate nucleus
5
3
1
2
1
layer of hippocampus
6
3
1
1
1
substantia nigra
5
2
1
1
+ See 52 more…
cell line
pituitary stalk
10
SK-N-DZ
4
2
1
1
SK-N-SH
4
3
1
SK-N-MC
2
1
1
1
2
BE(2)-C
1
1
1
1
2
+ See 10 more…
primary cell
fibroblast of villous mesenchyme
2
1
1
1
2
choroid plexus epithelial cell
2
1
1
1
1
cardiac fibroblast
3
2
astrocyte of the cerebellum
2
1
1
1
astrocyte of the hippocampus
2
1
1
1
+ See 7 more…
in vitro differentiated cells
ESC dervived hypothalamic neuron (arcuate nucleus)
1
ESC dervived hypothalamic progenitor (arcuate nucleus)
1
hippocampal neuron
1
stem cell
undifferentiated ESC (H9 cell line)
1
See all biosamples
Download