Toggle navigation
Home
About
Project overview
Policies
News
Contact
Data
Experiments
Annotations
Single Cell Embeddings
Statistical Models
Gene Perturbations
Data Standards & QC
Pipelines
Consortia
Publications
Tools
Single Cell Browser
Help
Getting started
Schema
Citing CMDGA
Annotation Matrix
Click or enter search terms to filter the experiments included in the matrix.
Annotation type
168
candidate regulatory elements
110
target gene predictions
101
chromatin state
52
accessible chromatin
50
histone modifications
36
Fine-mapped variants
30
eQTL
22
gene expression
20
variant allelic effects
19
binding sites
Date released
255
September, 2022
146
February, 2021
40
March, 2020
31
January, 2020
25
June, 2020
21
May, 2020
19
January, 2022
18
February, 2020
14
May, 2021
9
November, 2021
8
August, 2017
7
October, 2022
4
March, 2024
4
May, 2019
3
February, 2024
3
September, 2023
1
November, 2019
Available data
419
bed bed3+
93
bed bed9
70
tsv
27
bigWig
8
bigBed bed9
Organism
607
Homo sapiens
Biosample type
458
tissue
79
cell line
66
primary cell
4
in vitro differentiated cells
1
stem cell
Organ
949
epithelium
652
kidney
466
brain
458
connective tissue
375
musculature of body
311
lung
289
intestine
277
pancreas
266
vasculature
255
heart
244
limb
218
bodily fluid
215
embryo
207
blood
204
blood vessel
204
skin of body
174
large intestine
156
liver
146
extraembryonic component
119
stomach
109
eye
89
adipose tissue
89
bone element
87
mammary gland
84
small intestine
83
uterus
78
prostate gland
75
artery
73
adrenal gland
73
placenta
64
penis
64
ureter
62
lymph node
50
gonad
49
thymus
45
esophagus
43
spinal cord
34
spleen
26
testis
25
nerve
24
lymphoid tissue
23
ovary
23
thyroid gland
23
vein
21
lymphatic vessel
19
mouth
18
skeleton
16
bronchus
13
bone marrow
13
breast
13
pituitary gland
10
tongue
10
urinary bladder
10
vagina
5
trachea
4
nose
1
pericardium
Project
599
AMP
9
ENCODE
Genome assembly (visualization)
560
hg19
190
GRCh38
BIOSAMPLE
TYPE
608 results
search-icon
table-tab-icon
Clear Filters
candidate regulatory elements
target gene predictions
chromatin state
accessible chromatin
histone modifications
Fine-mapped variants
eQTL
gene expression
variant allelic effects
binding sites
tissue
stomach
40
21
19
3
1
1
1
brain
29
16
18
2
3
2
1
1
1
caudate nucleus
5
3
4
2
1
3
2
1
1
substantia nigra
5
2
3
1
3
3
1
cerebellum
3
2
2
1
1
3
2
2
+ See 63 more…
cell line
SK-N-DZ
4
2
2
1
1
SK-N-SH
4
3
2
1
pituitary stalk
10
SK-N-MC
2
1
1
1
1
2
BE(2)-C
1
1
1
1
1
2
+ See 10 more…
primary cell
endothelial cell of umbilical vein
6
4
5
2
1
2
choroid plexus epithelial cell
2
1
1
1
1
1
astrocyte of the cerebellum
2
1
1
1
1
astrocyte of the hippocampus
2
1
1
1
1
cardiac fibroblast
3
2
+ See 10 more…
in vitro differentiated cells
hippocampal neuron
1
1
ESC dervived hypothalamic neuron (arcuate nucleus)
1
ESC dervived hypothalamic progenitor (arcuate nucleus)
1
stem cell
undifferentiated ESC (H9 cell line)
1
See all biosamples
Download