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Schema
Citing CMDGA
Annotation Matrix
Click or enter search terms to filter the experiments included in the matrix.
Annotation type
134
target gene predictions
120
candidate regulatory elements
50
histone modifications
45
accessible chromatin
20
binding sites
10
variant allelic effects
6
chromatin state
Date released
128
September, 2022
119
February, 2021
51
February, 2024
23
June, 2020
18
January, 2020
13
May, 2021
12
May, 2020
7
October, 2022
6
August, 2017
3
September, 2023
2
March, 2020
2
November, 2021
1
January, 2022
Available data
385
bed bed3+
70
bed bed9
69
tsv
22
bigWig
6
bigBed bed9
Organism
385
Homo sapiens
Biosample type
217
tissue
128
cell line
36
primary cell
3
in vitro differentiated cells
1
stem cell
Organ
547
epithelium
330
connective tissue
309
brain
309
kidney
281
musculature of body
239
lung
228
intestine
190
bodily fluid
181
blood
178
embryo
175
limb
173
heart
165
skin of body
163
vasculature
159
pancreas
137
large intestine
123
blood vessel
112
extraembryonic component
101
liver
98
eye
93
stomach
76
uterus
73
mammary gland
70
bone element
64
small intestine
63
prostate gland
57
adrenal gland
56
placenta
54
lymph node
54
penis
51
ureter
49
adipose tissue
46
artery
38
thymus
37
gonad
33
esophagus
29
spinal cord
26
spleen
19
testis
18
lymphoid tissue
17
ovary
17
thyroid gland
17
vein
15
skeleton
14
bronchus
14
lymphatic vessel
14
nerve
13
mouth
11
bone marrow
11
pituitary gland
9
breast
7
tongue
7
urinary bladder
6
vagina
5
trachea
3
nose
Project
383
AMP
2
ENCODE
Genome assembly (visualization)
385
hg19
74
GRCh38
BIOSAMPLE
TYPE
385 results
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target gene predictions
candidate regulatory elements
histone modifications
accessible chromatin
binding sites
variant allelic effects
chromatin state
tissue
brain
16
29
3
2
1
1
caudate nucleus
3
5
1
2
1
layer of hippocampus
3
6
1
1
1
substantia nigra
2
5
1
1
temporal lobe
2
5
1
1
+ See 54 more…
cell line
HeLa-S3
55
5
1
pituitary stalk
10
SK-N-DZ
2
4
1
1
SK-N-SH
3
4
1
SK-N-MC
1
2
1
1
2
+ See 11 more…
primary cell
choroid plexus epithelial cell
1
2
1
1
1
cardiac fibroblast
3
2
astrocyte of the cerebellum
1
2
1
1
astrocyte of the hippocampus
1
2
1
1
brain microvascular endothelial cell
1
2
1
+ See 6 more…
in vitro differentiated cells
ESC dervived hypothalamic neuron (arcuate nucleus)
1
ESC dervived hypothalamic progenitor (arcuate nucleus)
1
hippocampal neuron
1
stem cell
undifferentiated ESC (H9 cell line)
1
See all biosamples
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