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Schema
Citing CMDGA
Annotation Matrix
Click or enter search terms to filter the experiments included in the matrix.
Annotation type
189
target gene predictions
163
candidate regulatory elements
101
chromatin state
74
histone modifications
65
binding sites
57
accessible chromatin
36
Fine-mapped variants
32
eQTL
22
gene expression
17
variant allelic effects
Date released
261
September, 2022
190
February, 2021
80
February, 2024
38
March, 2020
35
June, 2020
29
January, 2020
26
October, 2022
19
January, 2022
19
May, 2020
18
February, 2020
17
May, 2021
8
August, 2017
4
March, 2024
4
May, 2019
3
September, 2023
2
August, 2021
2
November, 2021
1
November, 2019
Available data
566
bed bed3+
93
bed bed9
70
tsv
22
bigWig
6
bigBed bed9
Organism
755
Homo sapiens
Biosample type
365
tissue
337
cell line
49
primary cell
4
in vitro differentiated cells
1
stem cell
Organ
949
epithelium
652
kidney
466
brain
458
connective tissue
375
musculature of body
311
lung
289
intestine
277
pancreas
266
vasculature
255
heart
244
limb
218
bodily fluid
215
embryo
207
blood
204
blood vessel
204
skin of body
174
large intestine
156
liver
146
extraembryonic component
119
stomach
109
eye
89
adipose tissue
89
bone element
87
mammary gland
84
small intestine
83
uterus
78
prostate gland
75
artery
73
adrenal gland
73
placenta
64
penis
64
ureter
62
lymph node
50
gonad
49
thymus
45
esophagus
43
spinal cord
34
spleen
26
testis
25
nerve
24
lymphoid tissue
23
ovary
23
thyroid gland
23
vein
21
lymphatic vessel
19
mouth
18
skeleton
16
bronchus
13
bone marrow
13
breast
13
pituitary gland
10
tongue
10
urinary bladder
10
vagina
5
trachea
4
nose
1
pericardium
Project
754
AMP
2
ENCODE
Genome assembly (visualization)
709
hg19
261
GRCh38
BIOSAMPLE
TYPE
756 results
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Clear Filters
target gene predictions
candidate regulatory elements
chromatin state
histone modifications
binding sites
accessible chromatin
Fine-mapped variants
eQTL
gene expression
variant allelic effects
tissue
brain
16
29
18
3
1
2
2
1
1
caudate nucleus
3
5
4
1
2
3
2
1
1
substantia nigra
2
5
3
1
3
3
1
cerebellum
2
3
2
1
1
3
2
2
frontal cortex
2
2
2
2
3
2
2
1
+ See 62 more…
cell line
HeLa-S3
55
5
3
1
K562
23
7
7
1
2
1
GM12878
8
2
2
1
2
1
SK-N-DZ
2
4
2
1
1
SK-N-SH
3
4
2
1
+ See 39 more…
primary cell
choroid plexus epithelial cell
1
2
1
1
1
1
astrocyte of the cerebellum
1
2
1
1
1
astrocyte of the hippocampus
1
2
1
1
1
peripheral blood mononuclear cell
4
1
1
cardiac fibroblast
3
2
+ See 8 more…
in vitro differentiated cells
hippocampal neuron
1
1
ESC dervived hypothalamic neuron (arcuate nucleus)
1
ESC dervived hypothalamic progenitor (arcuate nucleus)
1
stem cell
undifferentiated ESC (H9 cell line)
1
See all biosamples
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