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Schema
Citing CMDGA
Annotation Matrix
Click or enter search terms to filter the experiments included in the matrix.
Annotation type
251
gene expression
237
accessible chromatin
204
candidate regulatory elements
192
target gene predictions
121
chromatin state
89
differential activity
71
histone modifications
53
variant allelic effects
50
binding sites
36
Fine-mapped variants
31
eQTL
2
caQTL
Date released
319
September, 2022
296
February, 2021
158
September, 2023
123
November, 2021
49
February, 2024
44
June, 2020
44
May, 2021
40
January, 2020
40
March, 2020
34
March, 2023
30
May, 2020
26
February, 2020
20
August, 2021
20
January, 2021
18
January, 2022
15
November, 2022
12
February, 2023
11
October, 2022
9
August, 2017
7
April, 2020
6
August, 2018
5
October, 2019
4
May, 2019
3
March, 2024
2
May, 2022
2
November, 2019
Available data
807
bed bed3+
370
tsv
177
bigWig
112
bed bed9
78
txt
14
bigBed narrowPeak
8
bigBed bed9
3
bam
3
bed gappedPeak
3
csv
3
xls
Organism
1337
Homo sapiens
Biosample type
787
primary cell
409
tissue
117
cell line
23
in vitro differentiated cells
1
stem cell
Organ
949
epithelium
652
kidney
465
brain
460
connective tissue
375
musculature of body
311
lung
289
intestine
277
pancreas
266
vasculature
255
heart
244
limb
218
bodily fluid
215
embryo
207
blood
204
blood vessel
204
skin of body
174
large intestine
liver
146
extraembryonic component
119
stomach
109
eye
89
adipose tissue
89
bone element
87
mammary gland
84
small intestine
83
uterus
78
prostate gland
75
artery
73
adrenal gland
73
placenta
64
penis
64
ureter
62
lymph node
50
gonad
49
thymus
45
esophagus
43
spinal cord
34
spleen
26
testis
25
nerve
24
lymphoid tissue
23
ovary
23
thyroid gland
23
vein
21
lymphatic vessel
19
mouth
18
skeleton
16
bronchus
13
bone marrow
13
breast
13
pituitary gland
10
tongue
10
urinary bladder
10
vagina
5
trachea
4
nose
1
pericardium
Project
1030
AMP
155
KPMP
123
ENCODE
20
T1D
7
LungMap
2
community
Genome assembly (visualization)
969
hg19
347
GRCh38
organ_slims!
liver
BIOSAMPLE
TYPE
1337 results
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Clear Filters
gene expression
accessible chromatin
candidate regulatory elements
target gene predictions
chromatin state
differential activity
histone modifications
variant allelic effects
binding sites
Fine-mapped variants
eQTL
caQTL
primary cell
endothelial cell
9
15
7
1
2
2
1
2
epithelial cell of proximal tubule
16
1
2
1
1
1
1
glomerular endothelial cell
14
2
2
1
1
1
endothelial cell of umbilical vein
2
6
4
5
1
2
foreskin keratinocyte
11
4
4
+ See 149 more…
tissue
brain
1
2
29
16
18
3
1
1
2
caudate nucleus
1
2
5
3
4
1
1
3
1
pigmented layer of retina
20
substantia nigra
1
5
2
3
1
3
3
cerebellum
2
1
3
2
2
1
3
2
+ See 76 more…
cell line
EndoC_BH1
8
8
1
3
1
SK-N-DZ
1
4
2
2
1
SK-N-SH
4
3
2
1
pituitary stalk
10
SK-N-MC
1
2
1
1
1
2
+ See 19 more…
in vitro differentiated cells
retinal pigment epithelial cell
6
foreskin keratinocyte
1
1
1
mammary gland epithelial cell
1
1
1
pancreatic ductal cell
3
dermis microvascular lymphatic vessel endothelial cell
1
1
+ See 5 more…
stem cell
undifferentiated ESC (H9 cell line)
1
See all biosamples
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