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Schema
Citing CMDGA
Annotation Matrix
Click or enter search terms to filter the experiments included in the matrix.
Annotation type
83
accessible chromatin
63
target gene predictions
53
candidate regulatory elements
52
gene expression
33
differential activity
32
chromatin state
15
binding sites
15
eQTL
13
histone modifications
12
variant allelic effects
5
Fine-mapped variants
2
sQTL
2
variant to gene
Date released
92
September, 2022
72
February, 2021
47
March, 2023
33
May, 2021
26
February, 2024
22
January, 2021
21
November, 2021
10
June, 2020
9
March, 2020
8
August, 2021
7
August, 2018
7
May, 2020
6
October, 2019
4
January, 2020
4
January, 2022
2
February, 2020
2
November, 2019
1
April, 2019
1
April, 2020
1
August, 2017
1
February, 2023
1
January, 2018
1
June, 2021
1
May, 2022
1
October, 2022
Available data
243
bed bed3+
80
tsv
69
bigWig
29
bed bed9
14
bigBed narrowPeak
3
bam
3
bed gappedPeak
3
csv
3
xls
bigBed bed9
1
bed bed9+
Organism
380
Homo sapiens
Biosample type
156
primary cell
134
tissue
87
cell line
3
in vitro differentiated cells
Organ
947
epithelium
650
kidney
460
brain
458
connective tissue
372
musculature of body
311
lung
289
intestine
275
pancreas
258
vasculature
245
heart
240
limb
218
bodily fluid
215
embryo
207
blood
204
skin of body
196
blood vessel
174
large intestine
155
liver
146
extraembryonic component
119
stomach
109
eye
89
bone element
88
adipose tissue
87
mammary gland
84
small intestine
83
uterus
78
prostate gland
73
adrenal gland
73
artery
73
placenta
64
penis
64
ureter
62
lymph node
50
gonad
49
thymus
45
esophagus
43
spinal cord
34
spleen
26
testis
24
lymphoid tissue
24
nerve
23
ovary
23
thyroid gland
21
lymphatic vessel
21
vein
19
mouth
18
skeleton
16
bronchus
13
bone marrow
13
breast
13
pituitary gland
10
tongue
10
urinary bladder
10
vagina
5
trachea
4
nose
1
pericardium
Project
334
AMP
22
T1D
21
ENCODE
2
community
1
LungMap
Genome assembly (visualization)
285
hg19
88
GRCh38
files.file_type!
bigBed bed9
BIOSAMPLE
TYPE
380 results
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Clear Filters
accessible chromatin
target gene predictions
candidate regulatory elements
gene expression
differential activity
chromatin state
binding sites
eQTL
histone modifications
variant allelic effects
Fine-mapped variants
sQTL
variant to gene
primary cell
pancreatic ductal cell
6
3
3
3
1
2
1
pancreatic beta cell
8
3
3
3
1
pancreatic alpha cell
7
3
3
3
1
pancreatic acinar cell
6
3
3
3
1
pancreatic delta cell
5
4
3
3
1
+ See 21 more…
tissue
islet of Langerhans
6
1
11
2
2
13
1
1
2
2
2
body of pancreas
5
8
2
4
1
1
3
pancreas
5
5
5
2
1
1
1
1
endocrine pancreas
4
7
4
bone tissue
4
+ See 18 more…
cell line
EndoC_BH1
8
1
8
3
1
MG63
1
1
2
1
1
1
OCI-LY1
1
2
1
1
1
SJSA1
1
1
2
1
1
L1-S8
1
1
2
1
+ See 12 more…
in vitro differentiated cells
pancreatic ductal cell
3
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