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Schema
Citing CMDGA
Annotation Matrix
Click or enter search terms to filter the experiments included in the matrix.
Annotation type
200
candidate regulatory elements
132
target gene predictions
118
chromatin state
57
accessible chromatin
54
histone modifications
39
Fine-mapped variants
33
eQTL
26
binding sites
22
gene expression
18
variant allelic effects
Date released
308
September, 2022
170
February, 2021
42
March, 2020
31
June, 2020
30
January, 2020
21
January, 2022
19
February, 2020
19
May, 2020
17
May, 2021
9
August, 2017
8
November, 2021
8
October, 2022
5
February, 2024
4
May, 2019
3
March, 2024
3
September, 2023
1
April, 2020
1
November, 2019
Available data
489
bed bed3+
109
bed bed9
74
tsv
26
bigWig
6
bigBed bed9
Organism
698
Homo sapiens
Biosample type
519
tissue
114
cell line
61
primary cell
4
in vitro differentiated cells
1
stem cell
Organ
949
epithelium
652
kidney
466
brain
460
connective tissue
375
musculature of body
311
lung
289
intestine
277
pancreas
266
vasculature
255
heart
244
limb
218
bodily fluid
215
embryo
207
blood
204
blood vessel
204
skin of body
174
large intestine
156
liver
146
extraembryonic component
119
stomach
109
eye
89
adipose tissue
89
bone element
87
mammary gland
84
small intestine
83
uterus
78
prostate gland
75
artery
73
adrenal gland
73
placenta
64
penis
64
ureter
62
lymph node
50
gonad
49
thymus
45
esophagus
43
spinal cord
34
spleen
26
testis
25
nerve
24
lymphoid tissue
23
ovary
23
thyroid gland
23
vein
21
lymphatic vessel
19
mouth
18
skeleton
16
bronchus
13
bone marrow
13
breast
13
pituitary gland
10
tongue
10
urinary bladder
10
vagina
5
trachea
4
nose
1
pericardium
Project
690
AMP
8
ENCODE
1
LungMap
Genome assembly (visualization)
650
hg19
212
GRCh38
BIOSAMPLE
TYPE
699 results
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Clear Filters
candidate regulatory elements
target gene predictions
chromatin state
accessible chromatin
histone modifications
Fine-mapped variants
eQTL
binding sites
gene expression
variant allelic effects
tissue
brain
29
16
18
2
3
2
1
1
1
large intestine
27
14
13
1
1
spinal cord
14
8
7
1
1
sigmoid colon
10
7
5
1
caudate nucleus
5
3
4
2
1
3
2
1
1
+ See 70 more…
cell line
SK-N-DZ
4
2
2
1
1
SK-N-SH
4
3
2
1
pituitary stalk
10
HT-29
2
2
1
1
1
1
SK-N-MC
2
1
1
1
1
2
+ See 18 more…
primary cell
bronchial epithelial cell
4
2
2
1
1
2
choroid plexus epithelial cell
2
1
1
1
1
1
astrocyte of the cerebellum
2
1
1
1
1
astrocyte of the hippocampus
2
1
1
1
1
colon epithelial cell
3
3
+ See 9 more…
in vitro differentiated cells
hippocampal neuron
1
1
ESC dervived hypothalamic neuron (arcuate nucleus)
1
ESC dervived hypothalamic progenitor (arcuate nucleus)
1
stem cell
undifferentiated ESC (H9 cell line)
1
See all biosamples
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