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Schema
Citing CMDGA
Annotation Matrix
Click or enter search terms to filter the experiments included in the matrix.
Annotation type
79
target gene predictions
70
candidate regulatory elements
60
binding sites
44
chromatin state
39
accessible chromatin
39
histone modifications
25
gene expression
10
eQTL
5
variant allelic effects
4
differential activity
3
Fine-mapped variants
1
caQTL
Date released
121
September, 2022
101
February, 2021
58
February, 2024
20
October, 2022
18
June, 2020
12
August, 2021
10
March, 2020
7
May, 2021
7
November, 2021
5
August, 2017
4
March, 2023
3
January, 2020
3
May, 2020
2
February, 2020
2
May, 2022
1
April, 2020
1
January, 2022
1
July, 2020
1
March, 2024
1
November, 2019
1
September, 2018
Available data
296
bed bed3+
39
bed bed9
29
tsv
25
bigWig
3
csv
1
bam
1
bigBed bed9
Organism
379
Homo sapiens
Biosample type
223
cell line
88
primary cell
61
tissue
7
in vitro differentiated cells
Organ
949
epithelium
652
kidney
466
brain
458
connective tissue
375
musculature of body
311
lung
289
intestine
277
pancreas
266
vasculature
255
heart
244
limb
218
bodily fluid
215
embryo
207
blood
204
blood vessel
204
skin of body
174
large intestine
156
liver
146
extraembryonic component
119
stomach
109
eye
89
adipose tissue
89
bone element
87
mammary gland
84
small intestine
83
uterus
78
prostate gland
75
artery
73
adrenal gland
73
placenta
64
penis
64
ureter
62
lymph node
50
gonad
49
thymus
45
esophagus
43
spinal cord
34
spleen
26
testis
25
nerve
24
lymphoid tissue
23
ovary
23
thyroid gland
23
vein
21
lymphatic vessel
19
mouth
18
skeleton
16
bronchus
13
bone marrow
13
breast
13
pituitary gland
10
tongue
10
urinary bladder
10
vagina
5
trachea
4
nose
1
pericardium
Project
371
AMP
7
ENCODE
1
LungMap
Genome assembly (visualization)
346
hg19
115
GRCh38
2
hg18
BIOSAMPLE
TYPE
379 results
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Clear Filters
target gene predictions
candidate regulatory elements
binding sites
chromatin state
accessible chromatin
histone modifications
gene expression
eQTL
variant allelic effects
differential activity
Fine-mapped variants
caQTL
cell line
K562
23
7
2
7
1
1
HepG2
3
2
3
2
2
5
GM12878
8
2
2
2
1
1
GM06990
1
2
2
1
1
1
GM19240
2
1
2
1
1
1
+ See 27 more…
primary cell
hepatocyte
3
1
1
1
8
4
13
2
endothelial cell of hepatic sinusoid
6
6
4
bronchial epithelial cell
2
4
2
2
1
1
hepatic stellate cell
1
1
1
3
1
1
1
peripheral blood mononuclear cell
4
1
1
+ See 5 more…
tissue
liver
10
13
1
9
4
2
1
7
1
1
right lobe of liver
1
2
1
1
1
3
blood
2
whole blood
1
in vitro differentiated cells
hepatocyte
1
2
1
hepatocyte(AFP)
3
See all biosamples
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