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Schema
Citing CMDGA
Annotation Matrix
Click or enter search terms to filter the experiments included in the matrix.
Annotation type
159
candidate regulatory elements
99
chromatin state
92
target gene predictions
46
eQTL
46
histone modifications
42
Fine-mapped variants
36
gene expression
34
accessible chromatin
13
variant allelic effects
7
binding sites
2
differential activity
2
pQTL
Date released
245
September, 2022
144
February, 2021
46
March, 2020
25
January, 2020
22
February, 2020
22
January, 2022
15
May, 2020
14
June, 2020
11
August, 2017
10
August, 2021
6
May, 2021
5
February, 2024
4
May, 2019
3
March, 2024
2
September, 2018
1
January, 2018
1
November, 2019
1
November, 2022
Available data
358
bed bed3+
94
tsv
88
bed bed9
19
bigWig
7
bigBed bed9
Organism
577
Homo sapiens
Biosample type
578
tissue
315
primary cell
141
cell line
54
in vitro differentiated cells
2
stem cell
Organ
349
brain
306
musculature of body
301
kidney
236
limb
232
intestine
214
heart
181
lung
134
large intestine
114
pancreas
108
stomach
98
extraembryonic component
95
connective tissue
84
adipose tissue
84
blood vessel
84
vasculature
80
small intestine
70
eye
64
ureter
62
adrenal gland
61
epithelium
60
placenta
58
liver
48
thymus
42
artery
39
gonad
36
spinal cord
35
embryo
35
esophagus
34
spleen
25
nerve
25
skin of body
22
bone element
21
ovary
20
thyroid gland
18
lymphoid tissue
18
skeleton
18
testis
15
prostate gland
13
breast
13
uterus
11
mouth
10
tongue
10
urinary bladder
10
vagina
4
bodily fluid
3
blood
3
pituitary gland
2
mammary gland
2
penis
1
vein
Project
574
AMP
4
ITG
Genome assembly (visualization)
509
hg19
184
GRCh38
2
hg18
BIOSAMPLE
TYPE
578 results
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Clear Filters
candidate regulatory elements
chromatin state
target gene predictions
eQTL
histone modifications
Fine-mapped variants
gene expression
accessible chromatin
variant allelic effects
binding sites
differential activity
pQTL
tissue
brain
29
18
16
2
3
1
2
1
1
large intestine
27
13
14
1
1
adipose tissue
7
6
8
4
3
2
1
1
sigmoid colon
10
5
7
1
caudate nucleus
5
4
3
2
1
3
1
2
1
subcutaneous adipose tissue
2
1
6
3
5
2
1
1
transverse colon
8
4
5
1
1
omental fat pad
5
2
2
2
3
2
2
substantia nigra
5
3
2
3
1
3
1
cerebellum
3
2
2
2
1
3
2
1
frontal cortex
2
2
2
2
3
2
2
1
layer of hippocampus
6
4
3
1
1
1
putamen
2
1
1
3
1
3
1
2
1
temporal lobe
5
5
2
1
1
Ammon's horn
2
1
2
1
3
1
2
angular gyrus
4
4
2
colonic mucosa
4
3
2
1
cingulate gyrus
4
3
2
mucosa of rectum
4
3
2
globus pallidus
2
1
1
1
2
1
midbrain
1
1
1
1
2
1
1
muscle layer of colon
4
2
2
amygdala
2
1
3
1
hypothalamus
2
1
3
1
nucleus accumbens
2
1
3
1
Brodmann (1909) area 46
2
2
2
anterior cingulate cortex
2
3
1
cerebellum (Hemisphere)
1
3
1
1
medulla oblongata
1
1
1
2
1
middle frontal gyrus
2
1
1
1
1
pons
1
1
1
2
1
subcutaneous abdominal adipose tissue
5
1
cartilage tissue
2
1
2
cerebellar cortex
2
1
1
1
bone tissue
4
dorsolateral prefrontal cortex(Brain - Frontal Cortex (BA9))
1
3
inferior parietal cortex
1
1
1
1
rectum smooth muscle tissue
1
2
1
visceral abdominal adipose tissue
1
2
1
dorsolateral prefrontal cortex
1
1
1
prefrontal cortex
1
1
1
middle frontal area 46
2
pancreatic stellate cell
2
pituitary gland
1
1
omental fat pad
1
Brodmann (1909) area 9
1
anterior parahippocampal gyrus
1
arcuate nucleus of hypothalamus
1
bed nucleus of stria terminalis
1
beige adipocyte
1
cerebellar hemisphere
1
claustrum of brain
1
colon
1
colon - sigmoid
1
colon - transverse
1
colon sigmoid
1
dentate nucleus
1
diencephalon
1
dorsal lateral geniculate nucleus
1
dura mater
1
entorhinal cortex
1
frontal pole
1
locus ceruleus
1
medial dorsal nucleus of thalamus
1
medulloblastoma
1
mid-frontal lobe
1
myelencephalon
1
nucleus of ventral thalamus
1
paraventricular nucleus of hypothalamus
1
pineal body
1
piriform cortex
1
pituitary
1
pontine tegmentum
1
precentral gyrus
1
pulvinar nucleus
1
raphe nuclei
1
rectal smooth muscle tissue
1
red nucleus
1
septal nuclear complex
1
subiculum
1
superior parietal cortex
1
temporal pole
1
thalamic complex
1
white adipose tissue
1
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