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Schema
Citing CMDGA
Annotation Matrix
Click or enter search terms to filter the experiments included in the matrix.
Annotation type
193
candidate regulatory elements
151
target gene predictions
109
accessible chromatin
107
chromatin state
52
gene expression
binding sites
33
histone modifications
22
eQTL
19
variant allelic effects
14
differential activity
6
Fine-mapped variants
2
caQTL
2
pQTL
Date released
284
September, 2022
155
February, 2021
69
November, 2021
30
June, 2020
24
February, 2024
22
May, 2021
17
September, 2023
11
August, 2017
11
August, 2021
11
March, 2020
10
January, 2020
10
May, 2020
9
February, 2020
9
January, 2022
7
March, 2023
7
November, 2022
3
April, 2020
3
March, 2024
3
May, 2022
3
November, 2020
2
January, 2021
2
October, 2019
2
September, 2018
1
August, 2018
1
February, 2023
1
January, 2018
1
June, 2021
1
October, 2022
Available data
521
bed bed3+
96
bed bed9
66
bigWig
66
tsv
7
txt
2
bigBed bed9
1
bigBed narrowPeak
Organism
710
Homo sapiens
Biosample type
325
tissue
283
primary cell
54
cell line
47
in vitro differentiated cells
1
stem cell
Organ
906
epithelium
645
kidney
450
brain
427
connective tissue
368
musculature of body
302
lung
283
intestine
272
pancreas
250
heart
245
vasculature
242
limb
202
embryo
188
blood vessel
186
skin of body
172
bodily fluid
168
large intestine
162
blood
143
extraembryonic component
143
liver
119
stomach
103
eye
87
adipose tissue
84
small intestine
81
bone element
79
uterus
75
mammary gland
73
adrenal gland
70
placenta
70
prostate gland
69
artery
64
ureter
57
penis
50
lymph node
48
thymus
47
gonad
45
esophagus
41
spinal cord
33
spleen
25
nerve
24
lymphoid tissue
23
ovary
23
testis
23
thyroid gland
20
vein
19
lymphatic vessel
19
mouth
18
skeleton
14
bronchus
13
breast
13
pituitary gland
11
bone marrow
10
tongue
10
urinary bladder
10
vagina
4
nose
3
trachea
1
pericardium
Project
617
AMP
69
ENCODE
15
KPMP
4
ITG
3
LungMap
2
T1D
Genome assembly (visualization)
633
hg19
201
GRCh38
2
hg18
annotation_type!
binding sites
BIOSAMPLE
TYPE
710 results
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Clear Filters
candidate regulatory elements
target gene predictions
accessible chromatin
chromatin state
gene expression
histone modifications
eQTL
variant allelic effects
differential activity
Fine-mapped variants
caQTL
pQTL
tissue
small intestine
29
17
1
15
1
large intestine
27
14
1
13
1
adipose tissue
7
8
2
6
3
4
1
sigmoid colon
10
7
1
5
subcutaneous adipose tissue
2
2
1
5
6
1
1
3
+ See 25 more…
primary cell
fibroblast
4
16
2
6
pericyte cell
1
10
10
1
fibroblast of lung
6
4
4
osteoblast
2
2
5
1
2
2
fibroblast of cardiac tissue
3
4
2
3
+ See 50 more…
cell line
HT-29
2
2
1
1
1
GM23248
2
1
1
1
1
HCT116
2
3
1
SW480
2
1
1
1
1
HT1080
2
1
1
+ See 15 more…
in vitro differentiated cells
adipocyte
4
6
4
6
1
1
mesenchymal stem cell
3
3
1
2
1
chondrocyte
5
Adipose SGBS cell line (adipocyte)
1
Human Mesenchymal Cell derived Adipocytes
1
+ See 8 more…
stem cell
mesenchymal stem cell
1
See all biosamples
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