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Schema
Citing CMDGA
Annotation Matrix
Click or enter search terms to filter the experiments included in the matrix.
Annotation type
208
candidate regulatory elements
159
target gene predictions
113
chromatin state
111
accessible chromatin
53
gene expression
binding sites
33
histone modifications
25
eQTL
19
variant allelic effects
14
differential activity
6
Fine-mapped variants
2
caQTL
2
pQTL
Date released
302
September, 2022
164
February, 2021
69
November, 2021
31
June, 2020
24
February, 2024
23
May, 2021
17
September, 2023
12
March, 2020
11
August, 2017
11
August, 2021
10
January, 2020
10
January, 2022
10
May, 2020
9
February, 2020
7
March, 2023
7
November, 2022
4
March, 2024
3
April, 2020
3
May, 2022
3
November, 2020
2
January, 2021
2
May, 2024
2
October, 2019
2
September, 2018
1
August, 2018
1
February, 2023
1
January, 2018
1
June, 2021
1
November, 2019
1
October, 2022
Available data
546
bed bed3+
102
bed bed9
69
tsv
67
bigWig
7
txt
2
bigBed bed9
1
bigBed narrowPeak
Organism
745
Homo sapiens
Biosample type
358
tissue
285
primary cell
54
cell line
47
in vitro differentiated cells
1
stem cell
Organ
906
epithelium
645
kidney
450
brain
429
connective tissue
368
musculature of body
302
lung
283
intestine
272
pancreas
250
heart
245
vasculature
242
limb
202
embryo
188
blood vessel
186
skin of body
172
bodily fluid
168
large intestine
162
blood
143
extraembryonic component
143
liver
119
stomach
103
eye
87
adipose tissue
84
small intestine
81
bone element
79
uterus
75
mammary gland
73
adrenal gland
70
placenta
70
prostate gland
69
artery
64
ureter
57
penis
50
lymph node
48
thymus
47
gonad
45
esophagus
41
spinal cord
33
spleen
25
nerve
24
lymphoid tissue
23
ovary
23
testis
23
thyroid gland
20
vein
19
lymphatic vessel
19
mouth
18
skeleton
14
bronchus
13
breast
13
pituitary gland
11
bone marrow
10
tongue
10
urinary bladder
10
vagina
4
nose
3
trachea
1
pericardium
Project
650
AMP
69
ENCODE
15
KPMP
4
ITG
3
LungMap
2
T1D
2
community
Genome assembly (visualization)
664
hg19
209
GRCh38
2
hg18
annotation_type!
binding sites
BIOSAMPLE
TYPE
745 results
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Clear Filters
candidate regulatory elements
target gene predictions
chromatin state
accessible chromatin
gene expression
histone modifications
eQTL
variant allelic effects
differential activity
Fine-mapped variants
caQTL
pQTL
tissue
small intestine
29
17
15
1
1
large intestine
27
14
13
1
1
spleen
15
8
6
2
1
1
adipose tissue
7
8
6
2
3
4
1
sigmoid colon
10
7
5
1
+ See 26 more…
primary cell
fibroblast
4
16
2
6
pericyte cell
1
10
1
10
fibroblast of lung
6
4
4
osteoblast
2
2
1
5
2
2
fibroblast of cardiac tissue
3
4
3
2
+ See 51 more…
cell line
HT-29
2
2
1
1
1
GM23248
2
1
1
1
1
HCT116
2
3
1
SW480
2
1
1
1
1
HT1080
2
1
1
+ See 15 more…
in vitro differentiated cells
adipocyte
4
6
6
4
1
1
mesenchymal stem cell
3
3
2
1
1
chondrocyte
5
Adipose SGBS cell line (adipocyte)
1
Human Mesenchymal Cell derived Adipocytes
1
+ See 8 more…
stem cell
mesenchymal stem cell
1
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