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Schema
Citing CMDGA
Annotation Matrix
Click or enter search terms to filter the experiments included in the matrix.
Annotation type
88
accessible chromatin
80
candidate regulatory elements
78
target gene predictions
gene expression
48
chromatin state
31
binding sites
25
histone modifications
eQTL
16
variant allelic effects
14
differential activity
6
Fine-mapped variants
2
caQTL
2
pQTL
Date released
120
September, 2022
86
February, 2021
50
November, 2021
20
June, 2020
15
February, 2024
13
May, 2021
12
October, 2022
10
May, 2020
9
January, 2020
9
March, 2020
8
September, 2023
7
August, 2017
7
November, 2022
6
March, 2023
3
April, 2020
3
May, 2022
2
August, 2021
2
January, 2021
2
November, 2020
2
October, 2019
2
September, 2018
1
February, 2023
1
June, 2021
Available data
327
bed bed3+
55
bigWig
41
bed bed9
20
tsv
2
bigBed bed9
1
bigBed narrowPeak
Organism
390
Homo sapiens
Biosample type
246
primary cell
64
tissue
48
in vitro differentiated cells
31
cell line
1
stem cell
Organ
693
epithelium
446
kidney
418
brain
390
connective tissue
357
musculature of body
309
lung
283
intestine
234
limb
228
heart
224
vasculature
215
bodily fluid
214
pancreas
205
embryo
204
blood
199
skin of body
173
blood vessel
170
large intestine
145
extraembryonic component
124
liver
116
stomach
107
eye
87
mammary gland
85
bone element
83
small intestine
80
uterus
76
prostate gland
72
placenta
71
adrenal gland
64
penis
64
ureter
63
adipose tissue
62
artery
62
lymph node
49
thymus
45
gonad
40
esophagus
40
spinal cord
32
spleen
23
lymphoid tissue
23
testis
22
vein
21
nerve
21
ovary
21
thyroid gland
18
lymphatic vessel
18
skeleton
17
mouth
16
bronchus
13
bone marrow
11
breast
11
pituitary gland
9
tongue
9
urinary bladder
8
vagina
5
trachea
4
nose
Project
327
AMP
50
ENCODE
6
KPMP
3
LungMap
2
ITG
2
T1D
Genome assembly (visualization)
374
hg19
114
GRCh38
annotation_type!
gene expression
eQTL
BIOSAMPLE
TYPE
390 results
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Clear Filters
accessible chromatin
candidate regulatory elements
target gene predictions
chromatin state
binding sites
histone modifications
variant allelic effects
differential activity
Fine-mapped variants
caQTL
pQTL
primary cell
fibroblast
16
4
1
6
pericyte cell
10
1
10
1
fibroblast of lung
6
4
4
2
foreskin fibroblast
1
6
2
1
4
2
osteoblast
5
2
2
1
3
2
+ See 36 more…
tissue
adipose tissue
2
7
8
6
1
1
omental fat pad
2
5
2
2
3
subcutaneous adipose tissue
2
2
1
1
1
3
subcutaneous abdominal adipose tissue
5
1
cartilage tissue
1
2
+ See 5 more…
in vitro differentiated cells
adipocyte
4
4
6
6
1
1
mesenchymal stem cell
1
3
3
2
1
1
chondrocyte
5
fibroblast
1
1
Adipose SGBS cell line (adipocyte)
1
+ See 7 more…
cell line
GM23248
1
2
1
1
1
1
fibroblast of cardiac tissue
2
1
2
HT1080
2
1
1
foreskin fibroblast
1
1
1
adipose tissue derived mesenchymal stem cell
1
1
+ See 7 more…
stem cell
mesenchymal stem cell
1
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