Toggle navigation
Home
About
Project overview
Policies
News
Contact
Data
Experiments
Annotations
Single Cell Embeddings
Statistical Models
Gene Perturbations
Data Standards & QC
Pipelines
Consortia
Publications
Tools
Single Cell Browser
Help
Getting started
Schema
Citing CMDGA
Annotation Matrix
Click or enter search terms to filter the experiments included in the matrix.
Annotation type
109
accessible chromatin
102
candidate regulatory elements
98
target gene predictions
gene expression
64
chromatin state
43
binding sites
37
histone modifications
27
eQTL
19
variant allelic effects
18
differential activity
9
Fine-mapped variants
3
caQTL
2
pQTL
Date released
163
September, 2022
106
February, 2021
54
November, 2021
33
February, 2024
24
June, 2020
20
August, 2021
16
May, 2021
15
March, 2020
13
October, 2022
12
May, 2020
10
August, 2017
10
January, 2020
9
March, 2023
8
September, 2023
7
January, 2022
7
November, 2022
5
May, 2022
3
April, 2020
3
February, 2020
3
September, 2018
2
January, 2021
2
November, 2020
2
October, 2019
1
February, 2023
1
June, 2021
1
November, 2019
Available data
423
bed bed3+
67
bigWig
54
bed bed9
30
tsv
3
bigBed bed9
1
bam
1
bigBed narrowPeak
Organism
531
Homo sapiens
Biosample type
286
primary cell
135
tissue
57
cell line
52
in vitro differentiated cells
1
stem cell
Organ
696
epithelium
450
kidney
447
brain
409
connective tissue
364
musculature of body
310
lung
286
intestine
239
limb
234
heart
230
vasculature
229
pancreas
217
bodily fluid
206
blood
205
embryo
202
skin of body
179
blood vessel
172
large intestine
146
extraembryonic component
132
liver
117
stomach
108
eye
87
mammary gland
85
bone element
84
small intestine
81
uterus
77
prostate gland
76
adipose tissue
73
placenta
72
adrenal gland
67
artery
64
penis
64
ureter
62
lymph node
49
thymus
48
gonad
43
esophagus
42
spinal cord
33
spleen
25
testis
23
lymphoid tissue
23
nerve
22
ovary
22
thyroid gland
22
vein
18
lymphatic vessel
18
mouth
18
skeleton
16
bronchus
13
bone marrow
12
breast
12
pituitary gland
9
tongue
9
urinary bladder
9
vagina
5
trachea
4
nose
Project
462
AMP
54
ENCODE
6
KPMP
4
ITG
3
LungMap
2
T1D
Genome assembly (visualization)
500
hg19
170
GRCh38
4
hg18
annotation_type!
gene expression
BIOSAMPLE
TYPE
531 results
search-icon
table-tab-icon
Clear Filters
accessible chromatin
candidate regulatory elements
target gene predictions
chromatin state
binding sites
histone modifications
eQTL
variant allelic effects
differential activity
Fine-mapped variants
caQTL
pQTL
primary cell
fibroblast
16
4
1
2
6
pericyte cell
10
1
10
1
hepatocyte
8
1
3
1
1
4
2
fibroblast of lung
6
4
4
2
foreskin fibroblast
1
6
2
1
4
2
+ See 40 more…
tissue
liver
4
13
10
9
1
2
7
1
1
adipose tissue
2
7
8
6
1
4
1
omental fat pad
2
5
2
2
2
3
subcutaneous adipose tissue
2
2
1
6
1
1
3
right lobe of liver
2
1
1
1
3
+ See 7 more…
cell line
HepG2
2
2
3
2
3
5
GM23248
1
2
1
1
1
1
HuH-7
1
1
1
1
1
1
fibroblast of cardiac tissue
2
1
2
HT1080
2
1
1
+ See 10 more…
in vitro differentiated cells
adipocyte
4
4
6
6
1
1
mesenchymal stem cell
1
3
3
2
1
1
chondrocyte
5
hepatocyte
2
1
1
fibroblast
1
1
+ See 8 more…
stem cell
mesenchymal stem cell
1
See all biosamples
Download