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Schema
Citing CMDGA
Annotation Matrix
Click or enter search terms to filter the experiments included in the matrix.
Annotation type
126
candidate regulatory elements
120
accessible chromatin
107
target gene predictions
gene expression
79
chromatin state
49
binding sites
32
differential activity
32
histone modifications
29
variant allelic effects
25
eQTL
15
Fine-mapped variants
4
caQTL
2
pQTL
Date released
189
September, 2022
128
February, 2021
56
November, 2021
29
February, 2024
25
June, 2020
23
May, 2020
22
September, 2023
21
March, 2020
20
January, 2020
16
May, 2021
14
October, 2022
10
August, 2021
9
January, 2022
9
March, 2023
8
August, 2017
7
November, 2022
6
April, 2020
5
February, 2020
4
February, 2023
4
October, 2019
3
May, 2022
3
November, 2019
2
January, 2021
2
November, 2020
2
September, 2018
1
June, 2021
1
May, 2019
Available data
476
bed bed3+
79
bigWig
71
bed bed9
52
tsv
10
bigBed bed9
1
bigBed narrowPeak
Organism
620
Homo sapiens
Biosample type
370
primary cell
158
tissue
50
in vitro differentiated cells
41
cell line
1
stem cell
Organ
696
epithelium
450
kidney
447
brain
409
connective tissue
364
musculature of body
310
lung
286
intestine
239
limb
234
heart
230
vasculature
229
pancreas
217
bodily fluid
206
blood
205
embryo
202
skin of body
179
blood vessel
172
large intestine
146
extraembryonic component
132
liver
117
stomach
108
eye
87
mammary gland
85
bone element
84
small intestine
81
uterus
77
prostate gland
76
adipose tissue
73
placenta
72
adrenal gland
67
artery
64
penis
64
ureter
62
lymph node
49
thymus
48
gonad
43
esophagus
42
spinal cord
33
spleen
25
testis
23
lymphoid tissue
23
nerve
22
ovary
22
thyroid gland
22
vein
18
lymphatic vessel
18
mouth
18
skeleton
16
bronchus
13
bone marrow
12
breast
12
pituitary gland
9
tongue
9
urinary bladder
9
vagina
5
trachea
4
nose
Project
532
AMP
56
ENCODE
20
KPMP
6
LungMap
4
ITG
2
T1D
Genome assembly (visualization)
571
hg19
199
GRCh38
2
hg18
annotation_type!
gene expression
BIOSAMPLE
TYPE
620 results
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Clear Filters
candidate regulatory elements
accessible chromatin
target gene predictions
chromatin state
binding sites
differential activity
histone modifications
variant allelic effects
eQTL
Fine-mapped variants
caQTL
pQTL
primary cell
fibroblast
16
4
1
6
2
pericyte cell
1
10
10
1
endothelial cell of umbilical vein
6
2
4
5
2
1
fibroblast of lung
6
4
4
2
foreskin fibroblast
6
1
2
1
4
2
+ See 64 more…
tissue
adipose tissue
7
2
8
6
1
1
4
coronary artery
3
3
3
3
2
2
3
1
tibial artery
3
3
2
3
2
2
3
omental fat pad
5
2
2
2
2
3
subcutaneous adipose tissue
2
2
1
1
1
6
3
+ See 13 more…
in vitro differentiated cells
adipocyte
4
4
6
6
1
1
mesenchymal stem cell
3
1
3
2
1
1
chondrocyte
5
dermis microvascular lymphatic vessel endothelial cell
1
1
fibroblast
1
1
+ See 8 more…
cell line
GM23248
2
1
1
1
1
1
fibroblast of cardiac tissue
2
1
2
HT1080
2
1
1
choroid plexus epithelial cell
1
1
1
foreskin fibroblast
1
1
1
+ See 11 more…
stem cell
mesenchymal stem cell
1
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