Toggle navigation
Home
About
Project overview
Policies
News
Contact
Data
Experiments
Annotations
Single Cell Embeddings
Statistical Models
Gene Perturbations
Data Standards & QC
Pipelines
Consortia
Publications
Tools
Single Cell Browser
Help
Getting started
Schema
Citing CMDGA
Annotation Matrix
Click or enter search terms to filter the experiments included in the matrix.
Annotation type
107
candidate regulatory elements
93
accessible chromatin
93
target gene predictions
61
chromatin state
50
gene expression
39
binding sites
histone modifications
22
eQTL
17
variant allelic effects
differential activity
6
Fine-mapped variants
2
caQTL
2
pQTL
Date released
159
September, 2022
106
February, 2021
50
November, 2021
25
June, 2020
18
May, 2021
17
February, 2024
12
October, 2022
11
August, 2021
11
September, 2023
10
January, 2020
10
May, 2020
9
February, 2020
9
March, 2020
7
August, 2017
7
January, 2022
7
November, 2022
3
April, 2020
3
May, 2022
3
November, 2020
2
January, 2021
2
May, 2024
2
October, 2019
2
September, 2018
1
August, 2018
1
February, 2023
1
January, 2018
1
June, 2021
1
March, 2023
1
March, 2024
Available data
361
bed bed3+
55
bigWig
54
bed bed9
52
tsv
7
txt
2
bigBed bed9
1
bigBed narrowPeak
Organism
492
Homo sapiens
Biosample type
269
primary cell
105
tissue
71
cell line
46
in vitro differentiated cells
1
stem cell
Organ
829
epithelium
590
kidney
421
connective tissue
418
brain
367
musculature of body
307
lung
281
intestine
249
heart
242
limb
240
vasculature
238
pancreas
204
embryo
193
bodily fluid
191
skin of body
186
blood vessel
183
blood
169
large intestine
141
extraembryonic component
138
liver
118
stomach
105
eye
86
adipose tissue
84
small intestine
83
bone element
82
mammary gland
81
uterus
73
adrenal gland
71
prostate gland
70
placenta
68
artery
64
ureter
59
penis
58
lymph node
49
gonad
48
thymus
45
esophagus
43
spinal cord
34
spleen
25
nerve
25
testis
23
lymphoid tissue
23
ovary
23
thyroid gland
22
vein
19
mouth
18
lymphatic vessel
18
skeleton
15
bronchus
13
breast
12
pituitary gland
11
bone marrow
10
tongue
10
urinary bladder
10
vagina
4
nose
3
trachea
1
pericardium
Project
422
AMP
50
ENCODE
9
KPMP
4
ITG
3
LungMap
2
T1D
2
community
Genome assembly (visualization)
431
hg19
136
GRCh38
2
hg18
annotation_type!
histone modifications
differential activity
BIOSAMPLE
TYPE
492 results
search-icon
table-tab-icon
Clear Filters
candidate regulatory elements
accessible chromatin
target gene predictions
chromatin state
gene expression
binding sites
eQTL
variant allelic effects
Fine-mapped variants
caQTL
pQTL
primary cell
fibroblast
16
4
1
2
6
pericyte cell
1
10
10
1
fibroblast of lung
6
4
4
2
osteoblast
2
5
2
1
2
3
foreskin fibroblast
6
1
2
1
4
+ See 45 more…
tissue
adipose tissue
7
2
8
6
3
1
4
1
subcutaneous adipose tissue
2
2
1
5
6
1
3
omental fat pad
5
2
2
2
2
2
3
prostate gland
4
1
2
2
2
1
subcutaneous abdominal adipose tissue
5
1
+ See 8 more…
cell line
22Rv1
4
2
2
1
LNCaP clone FGC
3
2
2
GM23248
2
1
1
1
1
PC-3
2
1
1
1
1
RWPE1
2
1
1
1
1
+ See 16 more…
in vitro differentiated cells
adipocyte
4
4
6
6
1
1
mesenchymal stem cell
3
1
3
2
1
chondrocyte
5
Adipose SGBS cell line (adipocyte)
1
Human Mesenchymal Cell derived Adipocytes
1
+ See 7 more…
stem cell
mesenchymal stem cell
1
See all biosamples
Download