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Schema
Citing CMDGA
Annotation Matrix
Click or enter search terms to filter the experiments included in the matrix.
Annotation type
100
accessible chromatin
96
candidate regulatory elements
91
target gene predictions
59
chromatin state
58
gene expression
35
binding sites
histone modifications
27
eQTL
21
variant allelic effects
16
differential activity
12
Fine-mapped variants
4
caQTL
2
pQTL
Date released
149
September, 2022
97
February, 2021
52
November, 2021
23
June, 2020
22
September, 2023
19
February, 2024
19
May, 2021
15
March, 2020
15
May, 2020
14
January, 2020
13
February, 2020
12
October, 2022
11
August, 2021
10
January, 2022
7
August, 2017
7
March, 2023
7
November, 2022
4
February, 2023
3
April, 2020
3
May, 2022
3
November, 2020
2
January, 2021
2
May, 2024
2
November, 2019
2
October, 2019
2
September, 2018
1
August, 2018
1
January, 2018
1
June, 2021
1
March, 2024
1
May, 2019
Available data
357
bed bed3+
82
tsv
65
bigWig
52
bed bed9
7
txt
4
bigBed bed9
1
bigBed narrowPeak
Organism
521
Homo sapiens
Biosample type
293
primary cell
155
tissue
46
in vitro differentiated cells
26
cell line
1
stem cell
Organ
921
epithelium
646
kidney
435
connective tissue
418
brain
368
musculature of body
307
lung
281
intestine
271
pancreas
258
vasculature
249
heart
242
limb
204
embryo
198
blood vessel
193
bodily fluid
191
skin of body
183
blood
169
large intestine
142
liver
141
extraembryonic component
118
stomach
105
eye
88
adipose tissue
84
small intestine
83
bone element
82
mammary gland
81
uterus
73
adrenal gland
71
prostate gland
70
artery
70
placenta
64
ureter
59
penis
58
lymph node
49
gonad
48
thymus
45
esophagus
43
spinal cord
34
spleen
25
nerve
25
testis
23
lymphoid tissue
23
ovary
23
thyroid gland
22
vein
20
lymphatic vessel
19
mouth
18
skeleton
15
bronchus
13
breast
12
pituitary gland
11
bone marrow
10
tongue
10
urinary bladder
10
vagina
4
nose
3
trachea
1
pericardium
Project
438
AMP
52
ENCODE
20
KPMP
4
ITG
3
LungMap
2
T1D
2
community
Genome assembly (visualization)
431
hg19
155
GRCh38
2
hg18
annotation_type!
histone modifications
BIOSAMPLE
TYPE
521 results
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Clear Filters
accessible chromatin
candidate regulatory elements
target gene predictions
chromatin state
gene expression
binding sites
eQTL
variant allelic effects
differential activity
Fine-mapped variants
caQTL
pQTL
primary cell
fibroblast
16
4
1
2
6
pericyte cell
10
1
10
1
fibroblast of lung
6
4
4
2
osteoblast
5
2
2
1
2
3
foreskin fibroblast
1
6
2
1
4
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tissue
adipose tissue
2
7
8
6
3
1
4
1
coronary artery
3
3
3
3
1
2
2
3
1
subcutaneous adipose tissue
2
2
1
5
6
1
1
3
thyroid gland
1
8
5
4
1
tibial artery
3
3
2
3
1
2
2
3
+ See 11 more…
in vitro differentiated cells
adipocyte
4
4
6
6
1
1
mesenchymal stem cell
1
3
3
2
1
chondrocyte
5
Adipose SGBS cell line (adipocyte)
1
Human Mesenchymal Cell derived Adipocytes
1
+ See 7 more…
cell line
GM23248
1
2
1
1
1
HT1080
2
1
1
fibroblast of cardiac tissue
2
1
foreskin fibroblast
1
1
1
smooth muscle cell of the coronary artery
1
1
1
+ See 7 more…
stem cell
mesenchymal stem cell
1
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