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Schema
Citing CMDGA
Annotation Matrix
Click or enter search terms to filter the experiments included in the matrix.
Annotation type
190
candidate regulatory elements
154
target gene predictions
125
accessible chromatin
120
chromatin state
73
histone modifications
68
gene expression
50
eQTL
46
binding sites
42
Fine-mapped variants
30
variant allelic effects
14
differential activity
2
caQTL
pQTL
Date released
300
September, 2022
218
February, 2021
50
November, 2021
47
March, 2020
40
June, 2020
35
January, 2020
27
February, 2020
27
May, 2021
26
May, 2020
24
January, 2022
20
September, 2023
19
February, 2024
17
October, 2022
13
August, 2017
9
August, 2021
7
March, 2023
7
November, 2022
4
May, 2019
3
April, 2020
3
May, 2022
3
November, 2020
2
January, 2021
2
May, 2024
2
October, 2019
2
September, 2018
1
August, 2018
1
February, 2023
1
January, 2018
1
June, 2021
1
March, 2024
1
November, 2019
Available data
628
bed bed3+
132
tsv
107
bed bed9
72
bigWig
8
bigBed bed9
7
txt
1
bigBed narrowPeak
Organism
913
Homo sapiens
Biosample type
442
tissue
309
primary cell
107
cell line
54
in vitro differentiated cells
2
stem cell
Organ
949
epithelium
652
kidney
466
brain
458
connective tissue
375
musculature of body
311
lung
289
intestine
277
pancreas
266
vasculature
255
heart
244
limb
217
bodily fluid
215
embryo
207
blood
204
blood vessel
204
skin of body
174
large intestine
156
liver
146
extraembryonic component
119
stomach
109
eye
89
adipose tissue
89
bone element
87
mammary gland
84
small intestine
83
uterus
78
prostate gland
75
artery
73
adrenal gland
73
placenta
64
penis
64
ureter
62
lymph node
50
gonad
49
thymus
45
esophagus
43
spinal cord
34
spleen
26
testis
25
nerve
24
lymphoid tissue
23
ovary
23
thyroid gland
23
vein
21
lymphatic vessel
19
mouth
18
skeleton
16
bronchus
13
bone marrow
13
breast
13
pituitary gland
10
tongue
10
urinary bladder
10
vagina
5
trachea
4
nose
1
pericardium
Project
840
AMP
50
ENCODE
15
KPMP
3
LungMap
2
ITG
2
T1D
2
community
Genome assembly (visualization)
798
hg19
270
GRCh38
2
hg18
annotation_type!
pQTL
BIOSAMPLE
TYPE
914 results
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Clear Filters
candidate regulatory elements
target gene predictions
accessible chromatin
chromatin state
histone modifications
gene expression
eQTL
binding sites
Fine-mapped variants
variant allelic effects
differential activity
caQTL
tissue
brain
29
16
2
18
3
1
2
1
1
adipose tissue
7
8
2
6
3
4
1
1
caudate nucleus
5
3
2
4
1
1
2
3
1
subcutaneous adipose tissue
2
2
1
5
6
3
1
1
omental fat pad
5
2
2
2
2
2
3
+ See 67 more…
primary cell
fibroblast
4
16
2
1
6
pericyte cell
1
10
10
1
osteoblast
2
2
5
1
2
2
3
fibroblast of lung
6
4
4
2
foreskin fibroblast
6
2
1
1
2
4
+ See 50 more…
cell line
SK-N-DZ
4
2
1
2
1
SK-N-SH
4
3
2
1
pituitary stalk
10
SK-N-MC
2
1
1
1
1
2
BE(2)-C
1
1
1
1
1
2
+ See 20 more…
in vitro differentiated cells
adipocyte
4
6
4
6
1
1
1
mesenchymal stem cell
3
3
1
2
1
1
chondrocyte
5
fibroblast
1
1
hippocampal neuron
1
1
+ See 11 more…
stem cell
mesenchymal stem cell
1
undifferentiated ESC (H9 cell line)
1
See all biosamples
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