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Schema
Citing CMDGA
Annotation Matrix
Click or enter search terms to filter the experiments included in the matrix.
Annotation type
target gene predictions
127
candidate regulatory elements
100
accessible chromatin
77
binding sites
75
chromatin state
50
gene expression
50
histone modifications
21
eQTL
16
variant allelic effects
14
differential activity
6
Fine-mapped variants
3
pQTL
2
caQTL
Date released
183
February, 2021
130
September, 2022
32
June, 2020
32
November, 2021
31
October, 2022
18
February, 2024
15
September, 2023
14
August, 2021
10
January, 2020
9
August, 2017
9
February, 2020
9
May, 2020
7
March, 2023
7
November, 2022
6
January, 2022
6
March, 2020
3
April, 2020
3
May, 2021
3
May, 2022
3
November, 2020
2
October, 2019
2
September, 2018
1
August, 2018
1
February, 2023
1
January, 2018
1
January, 2021
1
June, 2021
1
March, 2024
Available data
385
bed bed3+
66
bed bed9
64
tsv
55
bigWig
7
txt
2
bigBed bed9
1
bigBed narrowPeak
Organism
541
Homo sapiens
Biosample type
240
primary cell
176
cell line
87
tissue
38
in vitro differentiated cells
Organ
827
epithelium
577
kidney
390
brain
380
connective tissue
295
musculature of body
235
vasculature
233
lung
233
pancreas
216
intestine
206
heart
195
limb
179
blood vessel
161
bodily fluid
160
skin of body
152
blood
135
liver
131
embryo
130
large intestine
110
extraembryonic component
100
eye
89
stomach
76
adipose tissue
73
bone element
68
mammary gland
67
artery
63
prostate gland
61
small intestine
56
placenta
53
lymph node
53
penis
52
adrenal gland
51
ureter
39
gonad
35
esophagus
35
thymus
34
spinal cord
26
spleen
25
uterus
22
nerve
22
testis
19
vein
18
lymphatic vessel
18
lymphoid tissue
17
thyroid gland
16
ovary
15
mouth
15
skeleton
13
bronchus
10
bone marrow
10
breast
8
tongue
8
vagina
7
urinary bladder
5
trachea
3
nose
3
pituitary gland
1
pericardium
Project
486
AMP
32
ENCODE
15
KPMP
4
ITG
3
LungMap
1
T1D
Genome assembly (visualization)
469
hg19
129
GRCh38
2
hg18
annotation_type!
target gene predictions
BIOSAMPLE
TYPE
541 results
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Clear Filters
candidate regulatory elements
accessible chromatin
binding sites
chromatin state
gene expression
histone modifications
eQTL
variant allelic effects
differential activity
Fine-mapped variants
pQTL
caQTL
primary cell
fibroblast
16
1
2
6
osteoblast
2
5
3
1
2
2
foreskin fibroblast
6
1
4
1
2
fibroblast of lung
6
2
4
pericyte cell
1
10
1
+ See 44 more…
cell line
K562
7
1
2
7
1
GM12878
2
1
2
2
1
GM06990
2
1
2
1
1
HL-60
2
1
2
1
1
CMK
2
1
1
1
1
+ See 38 more…
tissue
adipose tissue
7
2
1
6
3
4
1
subcutaneous adipose tissue
2
2
1
5
6
1
1
3
omental fat pad
5
2
2
2
2
3
subcutaneous abdominal adipose tissue
5
1
cartilage tissue
1
2
2
+ See 7 more…
in vitro differentiated cells
adipocyte
4
4
1
6
1
1
mesenchymal stem cell
3
1
1
2
1
chondrocyte
5
fibroblast
1
1
Adipose SGBS cell line (adipocyte)
1
+ See 5 more…
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